Gene detail

Detailed information of gfas1.m1.6539.m1 in Galaxea fascicularis

Genomic Location: Sc0000417:81458...99251
NR annotation: CAH3032427.1, unnamed protein product [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

gfas1.m1.6539.m1

GCCACTAGCTTTGGTATAGCCCTTCCCTCCTGGCTTGTTAGCAAGGAAAATTCCATGTGGGTTTTGGGAGCATATGGCCTTGCATTTATGGTGATTCTACCAATTGCAGTGGGAACCTGGTGGTACAAGTCAATTCAGTATAGTTGTGAGCAGATTCTGTTGGACACAACTCAGCTTTATTTCTACTTTTTTCACAAGACACCCACTATGCAGACTAAACGTGTTCTTATGATTTTGGCTGGGTCTTTGGAATTTGAAAAAGGTCATAATAATGAAATTCAGGAGAGACCAAGTGATAACGTAGAGTTACCAGAGTTGATGCGTGACTTATCCAACCTTGGAGATAAGAACAAAGAGCCTCCTCTGTGCTACCCTTACAGCATCAAAGCAAGGGCTCTGATACATGCTCACTTGTCGAGGTTGGAACTTCCTAGACTAACTCTTAAATCAGCTTCTAACACGCCAAGGCTCGAGACAATTGAAAACTGTATGCGTGTTAGTCAGATGATGGTGCAGGGCCAGTGGGATAACAAATCACCTTTGCTACAGCTGCCACATCTCAATCAGGAGAACTTGAGACATTTTACAACAAAAAAGCGAAGTGTTCGTTCCATAAGACAATTGGCATCCATGAAAGATGAGGATAGAAGGTCCTTGTTGAGGAACCTTACCGGGGAGCAGTATGAAGACGTAATCAATGTTTGCTCAATGTTTCCAGTGATTGAATTGAAAGTTAAACCACATGTCCTGGATGATGGGGATGAAGAAAGTGTCATTACAACCGGTTCAATATATGCTGAGAAATTCAGTACTCTGATTTTACAGGAGTTCTTTGAACAAGAGGCAGGTGATGAGCAAAGTAAATCACCTGGCGGTGACGGTCCTCATCAAAACGATGTCTTAGAGCCTAAGGGCTCGCCGCAGCCAGGTGGACAGAAGGTTTGGCAGAAAAACAAAAGGAAAGGGAAAAAAGCCAAGCCAGTAAAACAGCAGCCCAAGAAAAAGCCTGTGAAACAACCACCGAAAAAGAAGATCTCACAAGAAGAGAAAGAGAAAACCAACGAAGAGAAGGAAGAGCCAAGAGGAAAGAAAAGCAAAAGCAAAGCGATCAAGAACAAACCGGAGCACGATGAAAACGATGAGAAAAATGTAGAGGATGATAAAGATGGAGAAGTGGAGAAGGATGAGGCAGATAATGAAGACGAAGAAGAAGATGATGAAGAAATAGATACCAAAATTGAAGAAATCAAGAAACCAAAACCCAAATCACCAGACGATGAGTCTTCCACTTTGGAAAGCAGCAGCCCCGAAGAGGAGGACAGTGACGCCCCACAAGAAGACGTCAGTGCGCGGGATTCCGAAGATGAAGCCGAGTGGGACCGACTGCAAGCCGACGTCAAGGGTCGTGATAACGTCTTGGATCCAAAGTCAAAAGAAAGCCATGTTGTTCATGCCCCTTATTTCCCAGATATGGAACTCAAGTTTCAAGCTCCTCACAAAGCCAAAACGTATCATTACACCGTAACTTTACGCTCAGACTCCTACTTGGACTTTGACGTTCATCAAAATTTCAACATCAATGTAGAAGAAGCAAAGGAAGTAGAGACTAAACAGTGGGACTTTGACACAGATGAAGGAGATAAGGATGACTTGGACGAGAGTGGAGAAAGCGAAGAGGAAGAATATAGTGACTGAATAGCATCCCGCCCACCATCCTTCTCCTACCCGTCCAGACAGGACGTTTTACCCGAAATTTCTGAGCTCTGCCGCACTCTACTTTTGCTGGAGAGATCTAAATTATTTTCCCAACATATTTTATCCTATGAGATCTGAGTATCCTTTACATTGACCTTAAGGCGAACCAAGTGAAATTGCCTATCTTTAATTTCCTTTTCAAAATAGTGCCCTTTATTTTGAACACTGCCGAACTCTTCAGTATTCAATAATTGACTGAAGTGGAGGCTTACTGTGATGCAGATATTTTGCAAGCCGTGGCGAGGTAAATATTTACCACTATCCCCCTACATTAAAGTATTTTTGAGAATACACCAAATCATCGGAAATTAGTATAGGAAATCGTACGACTTCGTGTACAATTCGGGATTAATAGGTACGAATGATTTTGAAAGTTCTCAATATTGCAGGAGCCTTCAGGCGAGTGCAATTTGAGCACTTTCAAAATCACGAGTATCTATTAATCCCGAATTGTACTAGAAGGTTGTGCGATTTTTTATTTATAGTACATTCCACAAAATTACGAACTTACGCGCCGTTGTCATGGAAACTTAATAGGTACTCCTACGGAGTACTATTTGGGATTAATTGTACT

Protein

Uniprot

Uniprot term	Description
Q8VHE0	Translocation protein SEC63 homolog OS=Mus musculus OX=10090 GN=Sec63 PE=1 SV=4
Q9UGP8	Translocation protein SEC63 homolog OS=Homo sapiens OX=9606 GN=SEC63 PE=1 SV=2
Q5R660	Translocation protein SEC63 homolog OS=Pongo abelii OX=9601 GN=SEC63 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
--	--	--	--	--

InterPro

InterPro term	Type	Description	Source
IPR035892	Homologous_superfamily	C2 domain superfamily	Interproscan
IPR004179	Domain	Sec63 domain	Interproscan
IPR014756	Homologous_superfamily	Immunoglobulin E-set	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24075	SEC63 DOMAIN-CONTAINING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0006614	Biological Process	SRP-dependent cotranslational protein targeting to membrane	Interproscan
GO:0006620	Biological Process	post-translational protein targeting to endoplasmic reticulum membrane	Interproscan
GO:0008320	Molecular Function	protein transmembrane transporter activity	Interproscan
GO:0031207	Cellular Component	Sec62/Sec63 complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09540	SEC63, DNAJC23; translocation protein SEC63	-	Secretion system	ko02044	deepkoala