Gene detail

Detailed information of gfas1.m1.6585.m1 in Galaxea fascicularis

Genomic Location: Sc0000422:47481...64235
NR annotation: XP_044176082.1, LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 25-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q6GP15	Mediator of RNA polymerase II transcription subunit 25 OS=Xenopus laevis OX=8355 GN=med25 PE=2 SV=1
A4IHD9	Mediator of RNA polymerase II transcription subunit 25 OS=Xenopus tropicalis OX=8364 GN=med25 PE=2 SV=1
Q71SY5	Mediator of RNA polymerase II transcription subunit 25 OS=Homo sapiens OX=9606 GN=MED25 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF11232	Med25	Mediator complex subunit 25 PTOV activation and synapsin 2	Domain	Interproscan
PF11265	Med25_VWA	Mediator complex subunit 25 von Willebrand factor type A	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038196	Homologous_superfamily	Mediator complex subunit 25, PTOV domain superfamily	Interproscan
IPR021394	Domain	Mediator complex, subunit Med25, PTOV domain	Interproscan
IPR002035	Domain	von Willebrand factor, type A	Interproscan
IPR021419	Domain	Mediator of RNA polymerase II transcription subunit 25, von Willebrand factor type A domain	Interproscan
IPR036465	Homologous_superfamily	von Willebrand factor A-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12433	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 25	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005667	Cellular Component	transcription regulator complex	Interproscan
GO:0016592	Cellular Component	mediator complex	Interproscan
GO:0045944	Biological Process	positive regulation of transcription by RNA polymerase II	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K24978	A1CF; APOBEC1 complementation factor	-	Messenger RNA biogenesis	ko03019	deepkoala