Gene detail

Detailed information of gfas1.m1.7117.m1 in Galaxea fascicularis

Genomic Location: Sc0000489:39561...44491
NR annotation: XP_020616339.1, homeobox protein Hox-D9a-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

gfas1.m1.7117.m1

CCGAGACGTCAAGAAATACTACAGACATGTACGACTTGTACTCGACAAATTTCGCGTATCAGGCACCCTCTTATCCCAATAGTTATGCGTACAGCAACCCTGAGATGATTTCGTCTTGCAGATACCACTTCCAAGATTATGGGTACCCGGCAAGACACAATGTATCAGGCTTTCAACCTTGCGATCGTGTACCCAACGTGGCAAGAGTAGAGAGAACTAGAATTGTGGCGAATAACACGCCTTCAAAGCCCGACAACAACACAAGAACGCTCCATCACTTTCCCCCATCTCCACCACAAAACGTACACGTTATTAGAGGCTTTAACGACGAGCAACCTAAGAAGCTATGCAACGCGGACAAGATCTTTGAAGACCTCAGCGACGAAGATGAAAAAACAGAATCTGCCAAAGGGAGATCGCGAAAAGAAAGAACAGTTTTTACCAAGTACCAGCTTCACGAATTGGAGACAGAGTTCAGCAGAAACAATTACTTGTCAAGACTCAGGCGATACGAAGTGGCTGTGAGTTTGGATTTAACAGAAAGACAAGTCAAAGTTTGGTTCCAGAACAGACGAATGAAGTGGAAGAGGATCCGAGGAGGAATGCCACCAAGGAAAAACAACATGGCTGATCAGATGGACTTGGCAATCTGTTGAACAATGGTACACTGATGAAGCCTGTCACTTAGTTCAGTATAAAGCCGCGGTACGGACCTGGAAATCATCGAATTAAGTCGTTTCTCGCGCATAGAATGAATAACTTACTTATTACTTCGATTTCGATAACTTTTGAATTTAAAATAATTTCTATCATCCTTTAGAAATCCAAAGAAATCAGCTGAACAATCAAAAACTTTCAGGAACCACAACCTTCTGTTTTTTTGTATTTGAGGCCGGTTTGATTTAAAGCTTTAAGCTATCCTGATCTTACGCGCGGAGGACGCTATTATCCATCATTACACATCATATAAACAATTCAGTTTCAAAACATGAAATACACGCGGCCTTTAGCATAGATATTATGATAATAAGAAATACACTTTTGTTTATAGTTAGCAATTGGGTTAGGAAAACATCAAGCGTGAATGTAATTTGGAAAGATCAGGAGCGAGAAAATAATAACAGATAGGAGTTGGAGCACAAGTCAACAATACGTTTTACTTTATAAGTCTGGCAAGGCCATTGACTAGTTACACAGAGGATCAACCTAAAAACACACACACTGAACAATATCCAGTCTTCGGCTGTGGTGTTTTCGAGACTGTGTTGTCCAAAAGTTTAGTTCCCATAGTGTAGTTTTTAGTTGTAGCTATTAATAGAGCTTGCCACCTGAACATTCTAGCCCAAAGCATTTAAAATAAGTTTTAAGTAACTTTGGACTAAACTGGTCTGAGGAATTATGATTTTTGGATTTACATTTTAGGCGTTAACAAAACTTTAGCCGTCATGAAGCCACTTTTAAAATAACTGAGGGCACTGGGTCAGAAGTATCATTATCCACAAAGTTTTCATTTCATAGATTTAGAGAATAATGCACTTGATGGAAAGTTCCCTTTAAAAGTTTGTACGCGTTTTTCTACGTATATTCTGGGTGTTTTGTTTGTAAAAAAAAATTAATAAGATTTTTTAATTAGTTACTTTAGTCCACCAATGAAGGCTGTCGGTCATTTTCTTTGAGATTTTAAACACGTTAATTGGATTAGGTTTGTTCAATTTTGGGCTCCACATATGTTCTTGTTAAATGGTATTTCCTGCAAGCTGCTTCTTTTAGAATCTGTCACGATTTTACTGGAAACGAGCCAGGACAGATAAGGGCAATGTATGGTTTGCATGCTTCTAGCTCGAGTACAGAGTTTACCTTCCCGTTCGAGACAGCCATATCAAATTAGTGCAAATGAAAACTTAGGTAAGGGGAATTAGTTTCAGCTCATGATAGCGGGACACAAAAACGCTCGCTGGTGTCAAGCTTAGTTTCAAATTTTGCGAAACGGAAATATCAAGAATTTGTCAAATTGGCACTAAAAAACGCGTCGGCAGGAAAAAAGGGTTGTTATTCTGTGACAATTCGTGAAGGAATTATTCTGGAAGTGTAGACAAGTGGATGTAATTTGAAGTCAAAAACAGAACAGAAGCTGCACTCTAACTAATTCTACGGGAAAAAATTGAACCACAACAGATAGACACTTATGTATGTTTAAATTCCAGTTGTTAATCTAACACAAAATCACCAACTAGTTGGTTTCTTAAGATACACAGTGGAGTTATGATTTCTCAAAAGCCGTGCACATAATCTTTTGTGGGGATCACGCAAAGTCTCCAGGTTTTCTTTATTTATTACAGCAGATTATTTACAAGAATGCCTTGACGAATATTTACCAAGAAAGTGTATAAATAAGCACAGACGTTGATTATCACGGTATCAGTTTTCATAGTGGTGTAATAAAATTGCTTAAAAATTTGA

Protein

Uniprot

Gene family

Uniprot term	Description
F1Q4R9	Homeobox protein MOX-1 OS=Danio rerio OX=7955 GN=meox1 PE=2 SV=1
A1YGA4	Homeobox protein MOX-1 OS=Pan paniscus OX=9597 GN=MEOX1 PE=3 SV=1
A2T7T2	Homeobox protein MOX-1 OS=Pongo pygmaeus OX=9600 GN=MEOX1 PE=3 SV=1

Gene family	Subfamily
Transcription Factors Family	Homeobox

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00046	Homeodomain	Homeodomain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017970	Conserved_site	Homeobox, conserved site	Interproscan
IPR001356	Domain	Homeobox domain	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR020479	Domain	Homeobox domain, metazoa	Interproscan
IPR050848	Family	Homeobox domain-containing transcription factors	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24333	HOMEO BOX HB9 LIKE A-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09322	MEOX, MOX; homeobox protein MOX	-	Transcription factors	ko03000	deepkoala