Gene detail

Detailed information of gfas1.m1.719.m1 in Galaxea fascicularis

Genomic Location: Sc0000014:385001...392594
NR annotation: CAH3175464.1, unnamed protein product [Porites lobata]
Species abbreviation GFASC · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

gfas1.m1.719.m1

ATGGTATTACATCATGGACCAACTGTTCCTCCAAAATTAACTTCACAGAAAAAAATGGCTGGACAGCAACCTTTCCTGAATTCTTCTGGCCTAAACTTATTTCCTTTATTCGGGAATCCTTTAGGGAATTCCCAGCAGCTTCTTAACAGACTAAATGCATTACAAATGCCACAGCCAAACATTAATCAAGAAACATGTAGTGAGGAGAGTAGCAGAAGCCGAAGAATGCATTTTAATGAGTATTATGACAGGGGGCCACTAGAAAACCGCGGAGAGGAGATGTTCAGAGAACCATCCTACAGACTTAAATATGGCCAGTCTGAAGATGAAAGGAGGAAGGAGGTTGAAAAAAGGGATAAAATTCATGGGCTGATGGACAGATACATTTCACCAGATTTTGTGTTCCCTGAAATGGGCCCTGATAAGTATAGTGAGAGGCAAAGGGGACATGAGTTGAATAGGCGAAATTATGGTGCCTCTGCAACTAGGCAAACACCCATTCAGTTATCTTCCCAGTCAAAACATAGAGAGAGTAATGCTAGAGAGGGCAAGTATGGCACTCAGAATGATGTTGCTGTACCCTGGAATGCAGTACTACGCCGTAATTGTTATCTAGTGCCTCCTTTAGATGACACCTATGTGCTTCAATTGAGTGAAAAGCAGCCTGGATGTCGCACTGTTTTTATTAATGGTCTTCCCAAAATGGCAGATGAAGACATCATTTTAGAGATTTTTAGTGTATGTGGACCCATTGAAAAACTCACTGTGAACAATGGCGGTGCAAAGTCCCAAAAGAAACATTGCCAAGTGCAGTTTGTTGAGCATGGCTCTGCAGAGAAAGCAGTCAAGTTCAATGGCCATGTTCTTGTCATTGGGGATGGATGAGACAGAGAAACAAAAATTGGCAGAATTCGTGTTGATTATTCTAAATTACCAGTTGATAACAAAGAGACAGGCATTAAAATAGCAAATAAGCAACCTCATTCTCAAGATGAAGAGAAGTATGTGAGCGTTGTATATTCCCGCAAGGAAGTTTTCCATCTCCTTGACCTTATTCGCCACGATAAAGCCATAACTGAGTCTCTGAAAGTGTTAACTCATTGGTTTGAAAAAGGAGAATGTAATCGCTCGACAGTGAATGTTTTTCATACAGTCCTTAGCACCGTTCACACTCTCATCAAGCGGCTTATCAATAGACGTAAGGAACACGAACAGCTAGTAGAGATGCAGAAACAACAGGCTTTGGAAAGGGCCAAAGAAATCAAGCAACAATATGAGGCTGTAAGGAAGGTATTTGAAGCAGCAACTAAACAAAAGTCATGGGACCACTTCACCAAGGCACAACGGAAAAATATCACTCAGTGGCAAAGTGCGATTAAAAATGAAATCAAATCAGCTAAAGAGGCTGAGATTCAAAATCGTGTTGAGGTAGGCATGGACCTGGACGATGAAGTATCCAGCTTAGGTGGGCTTATTGAACAACCAGCACTGCAAATGGCTGAAAAAGAACAGAAAGAAGAACAAGATAAAGCCACCATCTTACCTTCAATATCCAAGAAGAGGCGGGTTGATGGTTCAGAATCTGACACAGACTCAGCTGTTGCTCTTAGGTTAGAGAATGAGAAGTTGCGCACACAAGTTGAGAGTTTGAAGGCAATTGCTGAACAAAACACAAGTCTGATGTGGTCCATGCAAAGCTATCAAAATCAAGCTGAACAGATTAGGCAGCAATACACTTACCTGGTGGCACAGAAAGATTATGAGATTTTTCAGCTGAAGAATGCTTTACAAGGTGCAAATATACTCGGTGATCCACAGAGAGCGATGTCTGACTTGGAAATTGTGGTGGACATGAGCAAAGACAGTCCAAGCACGACAGATATGGATATTGAAACAGATGAAGACGTTAGAGCAAACAACGACAGATCCATTAAAGGCGAAGACACGAAGAAGGCGGAAACAAAAAATGACGAAAAGTCAATAAATAATGGGAGCGAGGATGCGATGAATGAAAACAGTGGGCACCTCACTAGAGGACAGAATGGTGGTGAACAACATGCTGATACAAGATTTGGTGACTTGATTTCCTCGTCAAGTCAAGCTGGGCTTGATGTAACGCCGGAAGAATCTGATTTGTGTCGTGAAGGTGGTTCTATTAATAACGAAAACAGAATAATAGAAATTGGAGAGAGTGGGATTGAAGACAGAACGGAGAAGGTGAAGGAGGAGGATGATTTCATAAAGCGAGAGAAGATAGAAGAGGGAAAACCAGCTGATGCAACAGATACCCAAGCAGACGAAGAAATAAAACAAAAAGAGAACGAAGAAGAAGGAAATGGGGGAAAACAAGCGCAAAGGGAAGAGAGGGAACCGAACGAAAAAGTAGTGAACGGAGACAGTGCAGAGGAGGGAGCGGAAGGGAGTGGTCGTTTTGTGCAGATAGACGATGAGCAGTTTGAGGTGATTGATGACATGGATGAAGAAGACAGCGATGATGATTACAGGGAAGTGACTGTTCCAAGTCCCAGGCGTGAACGTCATACAGACAGTGAACAGTTCCTTACTGAATCATCTTTGAACGGGCCCGAGGAGGACAATGCACAGAAGAAGACAGAAATTTGTGAAGATGGTTACAAAGAAGTCACCACTCATACTGCCTTGTCTACAAATGATGACCAACTGAATGACCAGCTTCCCGCAGATTCGTTAGATTATGAAAGAGATTACGCTGCCCAGTATCAGGCGTGGCTGTCAACTGCTGCACCCAGTTACATTAGCCAGGATCATGGGCCTGCCAAGGTTCGCATTTCTGGTGAAGAACTCGTGCTTGTTGGCATCATATGTTCGTACTTACAGCTGTGCCCTTCAGGTGCAACAAGTGGCGAGGTACGAGACTACCTGTCGAGACAGTTCAAAGAACGCAGAAAGGAAGTGGTGGAAAGATTGTTATACAGTCTCCCTGTCTTGTTCAAGGCAGACGATGCCAGTGGAAATGCTAAATGGAAGTTCTGTGGATTTGAAAATTTGGAAGAGTTCAAGGGAGAAACATAAATGCAGATACAATATACTTGCGTTGTTTGGTGATCGTTATGAAGCTGTACGAATTTGAGGTCTATTTCAACAGCATGACTTGTTCGCCTACAACACGGTGACGTAAGAGTACAAAATGATGTCAGATAGCTTGTAATAAATATTGTAAAAACCTTACGGATGTTTAGCATTACCATAAAGTGCAGGTAAAAGTATTACGCAAAAATATATTGTATTTTCAACTTCCTACTCTTACCACGACAAATGACAAAAAAGGCTTTTTTGCAACGTTGCAGTTCCCGCCCTTCAAGAGCTTTGTTATTTAAATCGTTATTTTTTGTGTGTAGCAGAGAACATATTTTAACATCATGACTACTGAGTTTTTTCTGTGATCCCTACAACGGCTTTAGCGGGGTCTTTTCCTCTGTCGGAAAGTCTTCAAGTTCAGTTTCATCTTCCTTTTCAATAGATGTATTTGAGAGAAAAAACGCTGTTGATGATGTAGCTCGCAATGTTTCTTAGTTGCAGTTATTGAGAAAGTGTGACGTCTGTAGATACATGTAAAGAAAATCCAGCTCACATACTCCACATGTAAGTGTTTTTGATACT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8TC92	Ecto-NOX disulfide-thiol exchanger 1 OS=Homo sapiens OX=9606 GN=ENOX1 PE=1 SV=1
Q8BHR2	Ecto-NOX disulfide-thiol exchanger 1 OS=Mus musculus OX=10090 GN=Enox1 PE=2 SV=1
Q8R0Z2	Ecto-NOX disulfide-thiol exchanger 2 OS=Mus musculus OX=10090 GN=Enox2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005879 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00076 all species →	RRM_1	RNA recognition motif	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000504 all species →	Domain	RNA recognition motif domain	Interproscan
IPR035979 all species →	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR038876 all species →	Family	Ecto-NOX disulfide-thiol exchanger	Interproscan
IPR012677 all species →	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16001 all species →	ECTO-NOX DISULFIDE-THIOL EXCHANGER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007624 all species →	Biological Process	ultradian rhythm	Interproscan
GO:0009897 all species →	Cellular Component	external side of plasma membrane	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for gfas1.m1.719.m1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.