Gene detail

Detailed information of gfas1.m1.7496.m1 in Galaxea fascicularis

Genomic Location: Sc0000539:3858...12643
NR annotation: CAH3103736.1, unnamed protein product [Porites lobata]
Species Galaxea fascicularis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8IWL3	Iron-sulfur cluster co-chaperone protein HscB OS=Homo sapiens OX=9606 GN=HSCB PE=1 SV=3
Q8K3A0	Iron-sulfur cluster co-chaperone protein HscB OS=Mus musculus OX=10090 GN=Hscb PE=1 SV=2
B0TNY4	Co-chaperone protein HscB homolog OS=Shewanella halifaxensis (strain HAW-EB4) OX=458817 GN=hscB PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0010882 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13499 all species →	EF-hand_7	EF-hand domain pair	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004640 all species →	Family	Co-chaperone Hsc20	Interproscan
IPR036869 all species →	Homologous_superfamily	Chaperone J-domain superfamily	Interproscan
IPR002048 all species →	Domain	EF-hand domain	Interproscan
IPR001623 all species →	Domain	DnaJ domain	Interproscan
IPR018247 all species →	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR011992 all species →	Homologous_superfamily	EF-hand domain pair	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14021 all species →	IRON-SULFUR CLUSTER CO-CHAPERONE PROTEIN HSCB	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0001671 all species →	Molecular Function	ATPase activator activity	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0044571 all species →	Biological Process	[2Fe-2S] cluster assembly	Interproscan
GO:0051087 all species →	Molecular Function	protein-folding chaperone binding	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for gfas1.m1.7496.m1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.