Gene detail

Detailed information of gfas1.m1.7561.m1 in Galaxea fascicularis

Genomic Location: Sc0000546:19415...26035
NR annotation: CAH3018321.1, unnamed protein product [Porites evermanni]
Species Galaxea fascicularis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

gfas1.m1.7561.m1

AGTCGATTACACCACCAAGAAAAAAAATTACAAATCCCCGGTGGTGTGCCCAGGGTGGGGGGCATGATAACAGGTAGAATGAACCCTTCATTAGCGTTTGGCTGACAGGGTTTGCCGAGGAGGCTCTGGGCACGAGTACATGCTTCGCCCTCCCCATGACCTCGCCGTTGTAGAGAAAAAACATGGCCGCAGATATAGGAGAAAACAAATGCATTGTGTTGCAGAGCCGTCCAGGAGTGGACAAGGAACCAACCGAATCAAACTTTGCTCTTAAAACAATTGAGGTTCCACGCTGCAGTGAAGGACAAATTGTGCTAAAGACTTTATATTTGTCTGTGGATCCTTACATGAGATGTCGCATGAATGAAGACACTGGTTCTGCTTACCTGATTCCCTGGCCCTTGGGACAGCCACTCAGTGGCGGTGGAGTCGGGAAAGTTGTCCAGAGTAGAAGTGAAAAGTTCCGAGAGGGAGATATTGTGCACTCATTCGAGTGGTCATGGCAGGAATTCGTGGTGTTCTCTGACGATAACCCTTATATAATCAAGGAGAAGAGCCCCTTTCTGTGTTCTAACCCTTCTTTTGTGCTGGGTATTGTGGGATTGACTGGTTTAACATCTTTTCTCGGTATCAGAGAAAAAGCTCACATCTCATCTGGTGCAAACCAAGCAGTGGTTGTGAGTGGGGCTGCTGGAGCCTGTGGTATGGCTGCAGGGCAGATTGCCAAATTAGATGGCTGTGGTATTGTTATTGGCATTTGTGGAACAGATGAAAAGTGCCAATGGATAACAGAGGAGTTGGGCTTTGATTTTGCCATCAATTATAAGACAACCAAGAACATCAAAGAAGAGATACAGAGGAAGTGTCCAACAGGGATTGATGCATATTTTGACAATGTTGGAGGTGAAATTAGCAATGAGGTCATTCGATGAATGAATCAGAATGGCCATATTGTCTTGTGTGGGCAGATCTCTGTTTACAACAAAGATGTGCCATATCCTCCCCCGCTTCCAGAAGATGTTCAGAACATTCTCAGTAATAAAAATATAACACGTGAGCGCTTCTTAGTGATTGATTACATGGAAAAATTTCCAGATGCAAAGAAGCAGCTAGAGGCTTGGGTCCGAGAAGGGAAGCTTAAGTGTCGCGAAACGGTAGAGCAAGGCCTGGAGACTACTGGGCGAGCATTTGTATCTATGATGAGAGGGGGGAATATTGGAAAACAACTTGTGAAATTAGAGACAGTGAAAAGCGGAGTTTAGCATTAAAACCAGAAAGAAAAAACACGGCTAAATTCTGGTTGGAGATTTTGTCTAAATATCGCCATAACTGATGAGCTACGTTAAAAACTTGAAGGTGATTCGCATTTTCCAGACTGACTTGCGAATCAATGTTCATCAACAGAGATTTACCTTAATTTTGAAACCTTTGTAATTTAAAAAATAGTCTGCTGTGTGTCGATCGGGAGGACATGGATTGGGCCAATAATTTCTGCGGGAGTTTTAAGAAGCGAATTGATGACGATGGCGATGGCAGTGGCAGTGACGGCGCCCATCGACGATGACTTCGGATTTTTAAGACGTTGTATACTGGCTGGAAGCGTAAATTACAAAGCACGGTTGAATTGTCGCTTTTTAATTTTGAATGATTTTGTCGACTTTCAGCCGGGTGTCAGCCTGTGCCATATGGTAGGAGGGCCTTAAGGCACACTTTCCGTAGAAACGCGAATAATCGGGCGAAGACAAAACAGTTCCGATTGAGTTTACATTCTATCCTCAGAATTATAGTTATTCAGAGTTATTTCAGTGATCAGGTGCAACTCAACAAATCAGAAAATTCCGCTCAAGGAAATACTTTTTAGTCTAAAAATTTTCATTCTTTTTCGAATAAACACGATATTGATCAGTTTCTTTTACAACATTCTTAATTGCTTTGTGCTGGGTCCTATGAATATAGTATTTTCAAGTGGAAGATTCGAAGAAGAGAAAGTCCATCTCAGGTATGTCGCGCAGAGATTGCGAAGATTTTCATGTTTGCCTATTTACTTCTGAGCCGGCTTTTTAAAATAATTTTCTCAATGCAGATCAATGCATTTTGACCATTTTGGTCACCCAGGATACTGAGACTGAGAAATGTTGGGCAACAAAATGCTACACGGAGCCCAAAGCCAGCGATTGATCCTGGAAAGTTCGTTTGCAACGATTGCAAATTTTATAAATGTCTTTTCAGTTGCAAAACTAGTTTCTGGAATCACGATCGTGGAAACAACCGATATGCAGTGCAATTAATACTAAAGAAATTAATTTTGAGACGCAAACGCAGTCATTTAAATACAGTGCTTGGCGTTGCTAAGCTTTGCCAGTGTCTCAAGTAGCACGTAACAGAAAATAGATTAAAATTCTAATTAAGACCCGGTCGTGTACATAAATTATACTCATTTTGAGCGAGATTAAAATCGTTCGTATTTTCAGGTCTTGCGGAGCAAACTTTTATCAGCAAAAATCTGGTCTAGTATTCTCTTGGTATTATTATTATTAATTTTAAATTATTACAGAAGAAGAAGAAGACAAACAGCCGCTTGACAGATGATTTTTAGAGAATCAAGGAGAGCCATGTAAGAAGGTTATATTTTCAAGGCCCGTCATAGCTCAAGATGAAATCATCTGACGATATTGATGAAAACCTGGGTGTCGCGTCTGCAAGGCCGTCAGCAGAAACTGCCGATGTAACGAAGAAAAAACGGCCACGTTCGAGAGACATTACAGAGTTAAAGGTAGAGGCCGAAAATTTAAAAATGTCACTATCTTCTTTGACATCTGAGCGCGAAAAATCACAAGCTAAAGAAAGAACAGCTTATTTTGATGAGCTTTTCGAGTTGTTACAGACGACGAACGTTAAAATGGACAGAAAAATTCTGGAGAACATCGCGGAACTTTTAAAACTTGACGTTCACCCAGATTGCATCATAGAGTTGCTCAAAACAGTTATGGCGAAGACGGAAGAAGAAAAGGTTATATATATTTGAAGATCAGCAGATCACCCTACACAAAGACCTTGTCGCATATATTTCTGTTCTCCACATGTGATGAATGAATGATAAAAAATAATCGAATTATTTTTTTCTCTGTTGCGTATGTATATGTTACTTTTGAGTGGGCTTTTAATCAGTCATATTTAATGATTTTAAAATCGCATGGTTTTCTCTCATTTTTGTGTTGGTTTAATAGCGATATCGAATGTGCCATTTGTTAACAAAACTTGAATAAACAACTTGGCACCTGTCAAAGGCCGAGTTGCATCCATTTTGAGATTATTCATTAATTTGTTTCTACCCTGTTTTCCCAAAAAACTCTTTAATATTGTTGCATTATTACGGCATATATCATGATAATTAAAAGCCCATCAGTGCTAAAATCATGGACGACGATTACACTGTATTTTCTCGTTAAAACGGTTTTCAGTTGTGTACAGACGTCTCCCATTGCATTGTTTTTTTGTATTTCCTGTAACAGGGGAATGTTCACATGCCATACACAAAGTAAAATCAATTAATTTGTGAAGGTCAAAAGATGGAAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q32L99	Prostaglandin reductase 2 OS=Bos taurus OX=9913 GN=PTGR2 PE=2 SV=1
Q5BK81	Prostaglandin reductase 2 OS=Rattus norvegicus OX=10116 GN=Ptgr2 PE=2 SV=2
Q8VDQ1	Prostaglandin reductase 2 OS=Mus musculus OX=10090 GN=Ptgr2 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002336 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00107 all species →	ADH_zinc_N	Zinc-binding dehydrogenase	Domain	Interproscan
PF16884 all species →	ADH_N_2	N-terminal domain of oxidoreductase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR045010 all species →	Family	Medium-chain dehydrogenase/reductase	Interproscan
IPR011032 all species →	Homologous_superfamily	GroES-like superfamily	Interproscan
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR013149 all species →	Domain	Alcohol dehydrogenase-like, C-terminal	Interproscan
IPR041694 all species →	Domain	Oxidoreductase, N-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43205 all species →	PROSTAGLANDIN REDUCTASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006693 all species →	Biological Process	prostaglandin metabolic process	Interproscan
GO:0016628 all species →	Molecular Function	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	Interproscan
GO:0047522 all species →	Molecular Function	15-oxoprostaglandin 13-oxidase [NAD(P)+] activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for gfas1.m1.7561.m1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.