Detailed information of gfas1.m1.9481.m1 in Galaxea fascicularis

Genomic Location: Sc0000888:645...56545
NR annotation: CAH3047119.1, unnamed protein product, partial [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P13944Collagen alpha-1(XII) chain OS=Gallus gallus OX=9031 GN=COL12A1 PE=1 SV=3
Q60847Collagen alpha-1(XII) chain OS=Mus musculus OX=10090 GN=Col12a1 PE=2 SV=3
E1BMV3Matrilin-1 OS=Bos taurus OX=9913 GN=MATN1 PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00092VWAvon Willebrand factor type A domainDomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF00040fn2Fibronectin type II domainDomainInterproscan
PF12661hEGFHuman growth factor-like EGFDomainInterproscan
PF00008EGFEGF-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR050525FamilyExtracellular Matrix Assembly and OrganizationInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR000562DomainFibronectin type II domainInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR013032Conserved_siteEGF-like, conserved siteInterproscan
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR036943Homologous_superfamilyFibronectin type II domain superfamilyInterproscan
IPR013806Homologous_superfamilyKringle-like foldInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24020COLLAGEN ALPHAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan

TOP