Gene detail

Detailed information of jg11011.t2 in Edwardsia elegans

Genomic Location: ctg_0014:452387...455325
NR annotation: XP_032239542.2, uncharacterized protein LOC5514038 isoform X2 [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
O42354	E3 ubiquitin-protein ligase Mdm2 OS=Danio rerio OX=7955 GN=mdm2 PE=1 SV=1
Q7YRZ8	E3 ubiquitin-protein ligase Mdm2 OS=Felis catus OX=9685 GN=MDM2 PE=1 SV=1
P56950	E3 ubiquitin-protein ligase Mdm2 OS=Canis lupus familiaris OX=9615 GN=MDM2 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13920	zf-C3HC4_3	Zinc finger, C3HC4 type (RING finger)	Domain	Interproscan
PF03107	C1_2	C1 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR043145	Homologous_superfamily	Zinc finger, ZZ-type superfamily	Interproscan
IPR004146	Domain	DC1	Interproscan
IPR051652	Family	MDM2/MDM4 and MUL1	Interproscan
IPR046349	Homologous_superfamily	C1-like domain superfamily	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR000433	Domain	Zinc finger, ZZ-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12183	MITOCHONDRIAL UBIQUITIN LIGASE ACTIVATOR OF NFKB 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004842	Molecular Function	ubiquitin-protein transferase activity	Interproscan
GO:0016567	Biological Process	protein ubiquitination	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan