Detailed information of jg12261.t2 in Edwardsia elegans

Genomic Location: ctg_0604:15289...18404
NR annotation: XP_020895736.1, double C2-like domain-containing protein beta isoform X3 [Exaiptasia diaphana]
Species Edwardsia elegans · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q58D79Rab effector Noc2 OS=Bos taurus OX=9913 GN=RPH3AL PE=2 SV=1
Q9UNE2Rab effector Noc2 OS=Homo sapiens OX=9606 GN=RPH3AL PE=1 SV=1
O54880Rab effector Noc2 OS=Rattus norvegicus OX=10116 GN=Rph3al PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000239 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02318
all species →
FYVE_2FYVE-type zinc fingerFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043566
all species →
FamilyRabphilin/Doc2/Noc2Interproscan
IPR013083
all species →
Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR011011
all species →
Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR010911
all species →
DomainRab-binding domainInterproscan
IPR030541
all species →
DomainRabphilin-1, FYVE-like domainInterproscan
IPR041282
all species →
DomainFYVE-type zinc fingerInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45729
all species →
RABPHILIN, ISOFORM AInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006886
all species →
Biological Processintracellular protein transportInterproscan
GO:0031267
all species →
Molecular Functionsmall GTPase bindingInterproscan
GO:0006887
all species →
Biological ProcessexocytosisInterproscan
GO:0008021
all species →
Cellular Componentsynaptic vesicleInterproscan
GO:0016020
all species →
Cellular ComponentmembraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for jg12261.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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