Detailed information of jg16296.t2 in Edwardsia elegans

Genomic Location: ctg_0259:194220...207043
NR annotation: XP_048590006.1, general vesicular transport factor p115 [Nematostella vectensis]
Species abbreviation EELEG · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O60763General vesicular transport factor p115 OS=Homo sapiens OX=9606 GN=USO1 PE=1 SV=2
P41541General vesicular transport factor p115 OS=Bos taurus OX=9913 GN=USO1 PE=1 SV=1
P41542General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004575 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18770
all species →
Arm_vescicularArmadillo tether-repeat of vescicular transport factorRepeatInterproscan
PF04869
all species →
Uso1_p115_headUso1 / p115 like vesicle tethering protein, head regionRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR041209
all species →
RepeatVesicle tethering protein p115, armadillo tether-repeatInterproscan
IPR011989
all species →
Homologous_superfamilyArmadillo-like helicalInterproscan
IPR016024
all species →
Homologous_superfamilyArmadillo-type foldInterproscan
IPR006953
all species →
DomainVesicle tethering protein Uso1/P115-like, head domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10013
all species →
GENERAL VESICULAR TRANSPORT FACTOR P115Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005783
all species →
Cellular Componentendoplasmic reticulumInterproscan
GO:0005795
all species →
Cellular ComponentGolgi stackInterproscan
GO:0006886
all species →
Biological Processintracellular protein transportInterproscan
GO:0006888
all species →
Biological Processendoplasmic reticulum to Golgi vesicle-mediated transportInterproscan
GO:0012507
all species →
Cellular ComponentER to Golgi transport vesicle membraneInterproscan
GO:0045056
all species →
Biological ProcesstranscytosisInterproscan
GO:0048211
all species →
Biological ProcessGolgi vesicle dockingInterproscan
GO:0061025
all species →
Biological Processmembrane fusionInterproscan
GO:0000139
all species →
Cellular ComponentGolgi membraneInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan
GO:0048280
all species →
Biological Processvesicle fusion with Golgi apparatusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for jg16296.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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