Detailed information of jg18081.t1 in Edwardsia elegans

Genomic Location: ctg_0036:490056...497851
NR annotation: XP_001625239.3, tryptophan--tRNA ligase, cytoplasmic [Nematostella vectensis]
Species Edwardsia elegans · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P23381Tryptophan--tRNA ligase, cytoplasmic OS=Homo sapiens OX=9606 GN=WARS1 PE=1 SV=2
Q6P7B0Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars1 PE=1 SV=2
P23612Tryptophan--tRNA ligase, cytoplasmic OS=Oryctolagus cuniculus OX=9986 GN=WARS1 PE=2 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006061 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00579
all species →		tRNA-synt_1btRNA synthetases class I (W and Y)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002306
all species →		FamilyTryptophan-tRNA ligaseInterproscan
IPR002305
all species →		FamilyAminoacyl-tRNA synthetase, class IcInterproscan
IPR014729
all species →		Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10055
all species →		TRYPTOPHANYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000166
all species →		Molecular Functionnucleotide bindingInterproscan
GO:0004830
all species →		Molecular Functiontryptophan-tRNA ligase activityInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0006436
all species →		Biological Processtryptophanyl-tRNA aminoacylationInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0004812
all species →		Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0006418
all species →		Biological ProcesstRNA aminoacylation for protein translationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for jg18081.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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