Genomic Location: ctg_0064:190075...197824
NR annotation: XP_032218531.1, ectodysplasin-A isoform X2 [Nematostella vectensis]
| CDS |
| jg23668.t1 |
| Transcript |
| jg23668.t1 |
| Protein |
| jg23668.t1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01391 | Collagen | Collagen triple helix repeat (20 copies) | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR006052 | Domain | Tumour necrosis factor domain | Interproscan |
| IPR008160 | Repeat | Collagen triple helix repeat | Interproscan |
| IPR050149 | Family | Collagen superfamily | Interproscan |
| IPR008983 | Homologous_superfamily | Tumour necrosis factor-like domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24023 | COLLAGEN ALPHA | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005164 | Molecular Function | tumor necrosis factor receptor binding | Interproscan |
| GO:0006955 | Biological Process | immune response | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| GO:0005615 | Cellular Component | extracellular space | Interproscan |
| GO:0031012 | Cellular Component | extracellular matrix | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
