Detailed information of jg26753.t1 in Edwardsia elegans

Genomic Location: ctg_0017:386713...393946
NR annotation: XP_001627592.1, 50S ribosomal protein L27 [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q99N92Large ribosomal subunit protein bL27m OS=Mus musculus OX=10090 GN=Mrpl27 PE=1 SV=1
C4K900Large ribosomal subunit protein bL27 OS=Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT) OX=572265 GN=rpmA PE=3 SV=1
Q6MGS4Large ribosomal subunit protein bL27 OS=Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIMB 9529 / HD100) OX=264462 GN=rpmA PE=3 SV=1
Gene familySubfamily
Transcription Factors FamilybHLH

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07527Hairy_orangeHairy OrangeDomainInterproscan
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan
PF01016Ribosomal_L27Ribosomal L27 proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR018261Conserved_siteLarge ribosomal subunit protein bL27, conserved siteInterproscan
IPR001684FamilyLarge ribosomal subunit protein bL27Interproscan
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR003650DomainOrange domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15893RIBOSOMAL PROTEIN L27Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0005762Cellular Componentmitochondrial large ribosomal subunitInterproscan

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