Detailed information of jg28233.t1 in Edwardsia elegans

Genomic Location: ctg_0135:308049...317574
NR annotation: XP_048579760.1, signal recognition particle 54 kDa protein [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7ZVN5Signal recognition particle subunit SRP54 OS=Danio rerio OX=7955 GN=srp54 PE=2 SV=1
P14576Signal recognition particle subunit SRP54 OS=Mus musculus OX=10090 GN=Srp54 PE=1 SV=2
Q2T9U1Signal recognition particle subunit SRP54 OS=Bos taurus OX=9913 GN=SRP54 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02881SRP54_NSRP54-type protein, helical bundle domainDomainInterproscan
PF00448SRP54SRP54-type protein, GTPase domainDomainInterproscan
PF02978SRP_SPBSignal peptide binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR042101Homologous_superfamilySignal recognition particle SRP54, N-terminal domain superfamilyInterproscan
IPR036891Homologous_superfamilySignal recognition particle, SRP54 subunit, M-domain superfamilyInterproscan
IPR013822DomainSignal recognition particle SRP54, helical bundleInterproscan
IPR006325FamilySignal recognition particle, SRP54 subunit, eukaryoticInterproscan
IPR000897DomainSignal recognition particle, SRP54 subunit, GTPase domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR022941FamilySignal recognition particle, SRP54 subunitInterproscan
IPR004125DomainSignal recognition particle, SRP54 subunit, M-domainInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11564SIGNAL RECOGNITION PARTICLE 54K PROTEIN SRP54Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006614Biological ProcessSRP-dependent cotranslational protein targeting to membraneInterproscan
GO:0008312Molecular Function7S RNA bindingInterproscan
GO:0048500Cellular Componentsignal recognition particleInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005786Cellular Componentsignal recognition particle, endoplasmic reticulum targetingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006616Biological ProcessSRP-dependent cotranslational protein targeting to membrane, translocationInterproscan
GO:0030942Molecular Functionendoplasmic reticulum signal peptide bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03106SRP54, ffh; signal recognition particle subunit SRP54EC:3.6.5.4
Secretion systemko02044deepkoala

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