Detailed information of jg29758.t1 in Edwardsia elegans

Genomic Location: ctg_0187:297564...309317
NR annotation: KXJ21131.1, SWI/SNF complex subunit SMARCC2 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q6PDG5SWI/SNF complex subunit SMARCC2 OS=Mus musculus OX=10090 GN=Smarcc2 PE=1 SV=2
Q8TAQ2SWI/SNF complex subunit SMARCC2 OS=Homo sapiens OX=9606 GN=SMARCC2 PE=1 SV=1
Q92922SWI/SNF complex subunit SMARCC1 OS=Homo sapiens OX=9606 GN=SMARCC1 PE=1 SV=3
Gene familySubfamily
Transcription Factors FamilyMYB

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16495SWIRM-assoc_1SWIRM-associated region 1FamilyInterproscan
PF00249Myb_DNA-bindingMyb-like DNA-binding domainDomainInterproscan
PF16498SWIRM-assoc_3SWIRM-associated domain at the C-terminalFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032451DomainSMARCC, C-terminalInterproscan
IPR001005DomainSANT/Myb domainInterproscan
IPR032448DomainSMARCC, SWIRM-associated domainInterproscan
IPR017884DomainSANT domainInterproscan
IPR001007DomainVWFC domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12802SWI/SNF COMPLEX-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0016514Cellular ComponentSWI/SNF complexInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan
GO:0045893Biological Processpositive regulation of DNA-templated transcriptionInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

TOP