Gene detail

Detailed information of jg30880.t1 in Edwardsia elegans

Genomic Location: ctg_0329:185141...193323
NR annotation: XP_032236656.2, nucleoporin NUP42 [Nematostella vectensis]

Gene Structure

Sequence

Gene family

Gene family	Subfamily
Transcription Factors Family	zf-CCCH

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00642	zf-CCCH	Zinc finger C-x8-C-x5-C-x3-H type (and similar)	Family	Interproscan
PF18044	zf-CCCH_4	CCCH-type zinc finger	Domain	Interproscan
PF13634	Nucleoporin_FG	Nucleoporin FG repeat region	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000571	Domain	Zinc finger, CCCH-type	Interproscan
IPR041367	Domain	E3 ligase, CCCH-type zinc finger	Interproscan
IPR051767	Family	Nucleoporin NUP42 domain-containing protein	Interproscan
IPR025574	Repeat	Nucleoporin FG repeat	Interproscan
IPR036855	Homologous_superfamily	Zinc finger, CCCH-type superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46527	NUCLEOPORIN-LIKE PROTEIN 2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0046872	Molecular Function	metal ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14321	NUPL2, NUP42, CG1; nucleoporin-like protein 2	-	Messenger RNA biogenesis	ko03019	deepkoala