Detailed information of jg31270.t1 in Edwardsia elegans

Genomic Location: ctg_0009:153526...162706
NR annotation: XP_001635408.1, cdc42-interacting protein 4 homolog [Nematostella vectensis]
Species Edwardsia elegans · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6DCZ7Formin-binding protein 1-like OS=Xenopus laevis OX=8355 GN=fnbp1l PE=1 SV=1
Q6GNV5Formin-binding protein 1 homolog OS=Xenopus laevis OX=8355 GN=fnbp1 PE=2 SV=1
Q6GUF4Formin-binding protein 1-like OS=Xenopus tropicalis OX=8364 GN=fnbp1l PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005988 (this species only)
Ubiquitin familyUBD|Other|SH3 · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00018
all species →
SH3_1SH3 domainDomainInterproscan
PF00611
all species →
FCHFes/CIP4, and EFC/F-BAR homology domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001060
all species →
DomainFCH domainInterproscan
IPR001452
all species →
DomainSH3 domainInterproscan
IPR027267
all species →
Homologous_superfamilyAH/BAR domain superfamilyInterproscan
IPR036028
all species →
Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR031160
all species →
DomainF-BAR domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15735
all species →
FCH AND DOUBLE SH3 DOMAINS PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for jg31270.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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