Detailed information of jg32230.t1 in Edwardsia elegans

Genomic Location: ctg_0062:145449...151881
NR annotation: XP_001636472.1, 3-hydroxyacyl-CoA dehydrogenase type-2 isoform X1 [Nematostella vectensis]
Species Edwardsia elegans · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q997143-hydroxyacyl-CoA dehydrogenase type-2 OS=Homo sapiens OX=9606 GN=HSD17B10 PE=1 SV=3
O026913-hydroxyacyl-CoA dehydrogenase type-2 OS=Bos taurus OX=9913 GN=HSD17B10 PE=1 SV=3
O703513-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003026 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00106
all species →		adh_shortshort chain dehydrogenaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002347
all species →		FamilyShort-chain dehydrogenase/reductase SDRInterproscan
IPR020904
all species →		Conserved_siteShort-chain dehydrogenase/reductase, conserved siteInterproscan
IPR036291
all species →		Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43658
all species →		SHORT-CHAIN DEHYDROGENASE/REDUCTASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004303
all species →		Molecular Functionestradiol 17-beta-dehydrogenase [NAD(P)+] activityInterproscan
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0006631
all species →		Biological Processfatty acid metabolic processInterproscan
GO:0008209
all species →		Biological Processandrogen metabolic processInterproscan
GO:0008210
all species →		Biological Processestrogen metabolic processInterproscan
GO:0016491
all species →		Molecular Functionoxidoreductase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for jg32230.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP