Detailed information of jg32462.t1 in Edwardsia elegans

Genomic Location: ctg_0279:12425...15347
NR annotation: EDO32756.1, predicted protein [Nematostella vectensis]
Species abbreviation EELEG · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q96MN5Transcription elongation factor A N-terminal and central domain-containing protein 2 OS=Homo sapiens OX=9606 GN=TCEANC2 PE=1 SV=1
Q8R2M0Transcription elongation factor A N-terminal and central domain-containing protein 2 OS=Mus musculus OX=10090 GN=Tceanc2 PE=2 SV=2
Q5XIC7Transcription elongation factor A N-terminal and central domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Tceanc2 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009250 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07500
all species →		TFIIS_MTranscription factor S-II (TFIIS), central domainDomainInterproscan
PF08711
all species →		Med26TFIIS helical bundle-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036575
all species →		Homologous_superfamilyTranscription elongation factor S-II, central domain superfamilyInterproscan
IPR003618
all species →		DomainTranscription elongation factor S-II, central domainInterproscan
IPR035441
all species →		Homologous_superfamilyTFIIS/LEDGF domain superfamilyInterproscan
IPR003617
all species →		DomainTranscription elongation factor, TFIIS/CRSP70, N-terminal, sub-typeInterproscan
IPR017923
all species →		DomainTranscription factor IIS, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11477
all species →		TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006351
all species →		Biological ProcessDNA-templated transcriptionInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for jg32462.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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