Detailed information of jg47775.t3 in Edwardsia elegans

Genomic Location: ctg_0229:40305...87776
NR annotation: XP_048583421.1, fibrillin-1 isoform X2 [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P35555Fibrillin-1 OS=Homo sapiens OX=9606 GN=FBN1 PE=1 SV=4
P98133Fibrillin-1 OS=Bos taurus OX=9913 GN=FBN1 PE=1 SV=2
Q9TV36Fibrillin-1 OS=Sus scrofa OX=9823 GN=FBN1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF12661hEGFHuman growth factor-like EGFDomainInterproscan
PF00683TBTB domainFamilyInterproscan
PF12947EGF_3EGF domainDomainInterproscan
PF12662cEGFComplement Clr-like EGF-likeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR036773Homologous_superfamilyTGF-beta binding (TB) domain superfamilyInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR017878DomainTB domainInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR013032Conserved_siteEGF-like, conserved siteInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR024731DomainEGF domainInterproscan
IPR050751FamilyExtracellular matrix structural proteinInterproscan
IPR026823DomainComplement Clr-like EGF domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24034EGF-LIKE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K23342FBN2_3; fibrillin 2/3-Glycosaminoglycan binding proteinsko00536deepkoala

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