Gene detail

Detailed information of jg7578.t1 in Edwardsia elegans

Genomic Location: ctg_1180:71190...74136
NR annotation: XP_048585500.1, short-chain dehydrogenase/reductase family 9C member 7 [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
O54753	17-beta-hydroxysteroid dehydrogenase type 6 OS=Rattus norvegicus OX=10116 GN=Hsd17b6 PE=1 SV=2
O54909	Retinol dehydrogenase 16 OS=Mus musculus OX=10090 GN=Rdh16 PE=1 SV=1
O88451	Retinol dehydrogenase 7 OS=Mus musculus OX=10090 GN=Rdh7 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00106	adh_short	short chain dehydrogenase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002347	Family	Short-chain dehydrogenase/reductase SDR	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR020904	Conserved_site	Short-chain dehydrogenase/reductase, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43313	SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9C	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008202	Biological Process	steroid metabolic process	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0043231	Cellular Component	intracellular membrane-bounded organelle	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K13369	HSD17B6; 17beta-estradiol 17-dehydrogenase / all-trans-retinol dehydrogenase (NAD+) / 3alpha(17beta)-hydroxysteroid dehydrogenase (NAD+)	EC:1.1.1.62 EC:1.1.1.105 EC:1.1.1.239	Retinol metabolism	ko00830	deepkoala