Detailed information of jg8528.t1 in Edwardsia elegans

Genomic Location: ctg_0192:121362...128050
NR annotation: XP_048584765.1, uncharacterized protein LOC116618752 isoform X6 [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q04615Vinculin (Fragment) OS=Xenopus laevis OX=8355 GN=vcl PE=2 SV=1
Q64727Vinculin OS=Mus musculus OX=10090 GN=Vcl PE=1 SV=4
P85972Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01044VinculinVinculin familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006077FamilyVinculin/alpha-cateninInterproscan
IPR017997FamilyVinculinInterproscan
IPR001033FamilyAlpha-cateninInterproscan
IPR036723Homologous_superfamilyAlpha-catenin/vinculin-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46180VINCULINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007155Biological Processcell adhesionInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan
GO:0003779Molecular Functionactin bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005856Cellular ComponentcytoskeletonInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0005912Cellular Componentadherens junctionInterproscan
GO:0005925Cellular Componentfocal adhesionInterproscan
GO:0008013Molecular Functionbeta-catenin bindingInterproscan
GO:0044291Cellular Componentcell-cell contact zoneInterproscan
GO:0045294Molecular Functionalpha-catenin bindingInterproscan
GO:0045296Molecular Functioncadherin bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24886TOGARAM; TOG array regulator of axonemal microtubules protein-Cilium and associated proteinsko03037deepkoala

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