Detailed information of jg8782.t1 in Edwardsia elegans

Genomic Location: ctg_0005:183012...187065
NR annotation: XP_001641202.1, cation channel sperm-associated auxiliary subunit beta [Nematostella vectensis]
Species Edwardsia elegans · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A2RTF1Cation channel sperm-associated auxiliary subunit beta OS=Mus musculus OX=10090 GN=Catsperb PE=1 SV=1
Q9H7T0Cation channel sperm-associated auxiliary subunit beta OS=Homo sapiens OX=9606 GN=CATSPERB PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008352 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21541
all species →
CATSPERB_1stCATSPER protein subunit beta protein 1st domainDomainInterproscan
PF21548
all species →
CATSPERB_2ndCATSPER subunit beta protein 2nd domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR028748
all species →
FamilyCation channel sperm-associated auxiliary subunit betaInterproscan
IPR048786
all species →
DomainCation channel sperm-associated auxiliary subunit beta, first domainInterproscan
IPR048788
all species →
DomainCation channel sperm-associated auxiliary subunit beta, 2nd domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14705
all species →
CATION CHANNEL SPERM-ASSOCIATED PROTEIN SUBUNIT BETAInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005929
all species →
Cellular ComponentciliumInterproscan
GO:0036128
all species →
Cellular ComponentCatSper complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for jg8782.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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