Gene detail

Detailed information of jg8846.t1 in Edwardsia elegans

Genomic Location: ctg_0005:703829...704845
NR annotation: XP_032222101.1, homeobox protein MSX-3 [Nematostella vectensis]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
P13297	Homeobox protein MSX-1 OS=Mus musculus OX=10090 GN=Msx1 PE=1 SV=4
Q2VL78	Homeobox protein MSX-1 (Fragment) OS=Lemur catta OX=9447 GN=MSX1 PE=3 SV=1
Q2VL77	Homeobox protein MSX-1 (Fragment) OS=Lepilemur edwardsi OX=122230 GN=MSX1 PE=3 SV=1

Gene family	Subfamily
Transcription Factors Family	Homeobox

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00046	Homeodomain	Homeodomain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000047	Conserved_site	Helix-turn-helix motif	Interproscan
IPR001356	Domain	Homeobox domain	Interproscan
IPR020479	Domain	Homeobox domain, metazoa	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR017970	Conserved_site	Homeobox, conserved site	Interproscan
IPR050674	Family	Msh Homeobox Transcriptional Regulators	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24338	HOMEOBOX PROTEIN MSX	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0000977	Molecular Function	RNA polymerase II transcription regulatory region sequence-specific DNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0048598	Biological Process	embryonic morphogenesis	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09341	MSX; homeobox protein MSX	-	Transcription factors	ko03000	deepkoala