Detailed information of jg9180.t1 in Edwardsia elegans

Genomic Location: ctg_0033:265519...292090
NR annotation: XP_048580487.1, cadherin-23-like isoform X2 [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6V0I7Protocadherin Fat 4 OS=Homo sapiens OX=9606 GN=FAT4 PE=1 SV=2
Q2PZL6Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV=2
Q24292Protein dachsous OS=Drosophila melanogaster OX=7227 GN=ds PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06367Drf_FH3Diaphanous FH3 DomainRepeatInterproscan
PF06371Drf_GBDDiaphanous GTPase-binding DomainRepeatInterproscan
PF00028CadherinCadherin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR010473DomainFormin, GTPase-binding domainInterproscan
IPR050174FamilyProtocadherin/Cadherin-related Cell AdhesionInterproscan
IPR010472DomainFormin, FH3 domainInterproscan
IPR014768DomainRho GTPase-binding/formin homology 3 (GBD/FH3) domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24028CADHERIN-87AInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0003779Molecular Functionactin bindingInterproscan
GO:0030036Biological Processactin cytoskeleton organizationInterproscan
GO:0031267Molecular Functionsmall GTPase bindingInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0016043Biological Processcellular component organizationInterproscan

TOP