Gene detail

Detailed information of pspe_0.1.m1.10148.m1 in Pachyseris speciosa

Genomic Location: Sc0000027:857989...875655
NR annotation: CAH3189033.1, unnamed protein product [Porites evermanni]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

pspe_0.1.m1.10148.m1

GTGATCTGTTGTTGCTCGTTTGTTGGGTGGTGGTCGATCTTCAGTATTATCAGTTCAACGGAATCTGTTCAACGAACGCTATGGCTGAGAGAGTCGAACAAGGAAAGATATACAAGGAGCCCGCTGTCCGAGTACCAAGCCTTCAGCGTCTATCTGAAATCGCGCGAGGTCTGGGACTTGACATGGAGGAGAGTGAACTGGCAGACTATAAAGAAATTATCGCCATGACGCTGGGCGATACCTATCAGCGATTGTACGAGTTACCATACCCCAAGCTTCCAGTGAAATATCCACGGACACCAGGCTACAGACCAACGCATGAGGAAAACCCTTGCAATGCTTGGTACTGGCTCTGTGACATCAAAGGCGCATCAAGCGGTAAACTTCAGGGTAGAACAGTGGCCATCAAAGACAACACGTGTGTAGCAGGAGTGCCAATGATGAATGGCTCTCTCACGCTGGACGGGTTTATCCCGGATGTTGACGCCACTGTAGTGTCCCGGATATTGGACGCTGGTGGGAACATTGTTGGCAAAGCTGTTTGTGAGAATTTAAGCGCCAGCGGTGGAAGCTTTACTGCTGTTACAGGACCTGTGTTGAATCCATACAACAAAACAAGAATGGCTGGAGGATCCTCTTCTGGATCTGCAGCTTTGGTGGCAGGAGAGCACGTTGACATGGCAACCGGCTGTAGCCAAGCAGGATCCATCAGGATTCCATCTGCTACGTGCGGCATTGTGGGATTGAAACCAACCTACGGACTGGTTCCATATACGGGCATCATGCCGATGGAGTTCACTTTGGATCATACAGGGCCGATGACAAGGACTGTTTATGATACTGCTTTGATGCTGGAGGTTATGGCGGGTTATGATGAGGGTCTGGACCCAAGACAACCGCGAGACCTTGAAGTTCCAGAGTATACTGTACTGCTTACAGGAAACatagaaaatatgaagattggAATCCTTAAGGAAGGGTTTGGTTTGAAGACTTCCGAGCCGGACGTTGATAAGATGGTACTAGAAGCCGCTTGCATCCTGGGTAGCAAGTGCGGCGCAGTCGTCGAGGAGGTTTCAGTCCCGATGCATTGGGATGGTATTGGAATCTCTGCAGCCATTTTACAGAATGGGGGCGATCGAATGATGTTTGAAGGAGCTGGTTTTGGTTCTTCTGCGAAAATGTACTATGATACTACACTCCAAGAAGCAGTTTTCCGAGGCCTGAAATCCCATTCTAACGACATGTCAAGAGTCTGCAAATTTATGAGGCTCATTGCAAAGTATTTGCATGAAGATTACAGCAGCATTTATTACGGAAAAGCGCAAAACCTGGGGCGAGTACTTTGCAAAGCTTATGACGAAGCACTCCAGAAGTATGACGTGTTGATTCTACCGACCATTCCCAAGAAGGCACCAGTGTTCCCGCAAGCCAATCCCTCTCTGAAAGAATATATGGAAAAAGCGATGGAAAATGTCGTAAACTGTTCTCAATTCAACGTCACAGGACACCCAGCCCTGACCATCAATGCAGGGTTCAGTGAGGGTTTACCAGTTGGTATGATGATCGTGGGGAAGAAATTTGATGAGGTCACTGTTCTCAATGTCGCTTACGCTTACGAGAATATCAGAGATGCCAACCAGTGATTATGTGTTCTTTAAAGAAAGCTTTATATTCAAGCTTATTGCAGTGTTAATCTTTAGAAACATTTTGATAGCCtttagaaaacaataattgaGTCTATTTCTAGTTAAACTGGCAGTCTGTCAAGGATGTGTGACTTGCAATAAAGTTACCTCTTTGAGCGCTTTTCAagtgagtgttgtaaaaccaaaaccaaagcaatcagaaaacaggcacgcggcgcaatgagccaatcagaattaaaAGCAATTACACcaaccggtgcaaagcgcgggaaaatgcgagcGTGTAAGTCGCGATTGGCTTTGGTTTtcgttctcattggttgagaaagaggCGCGAATcttgtcaaccaatcacagagcgaagcaatgcaaagccAAAGCCAACACAGTTCATTTTCGatgttcaattgaaaaccgctccaacCATTTAGTCTGAGACTAAAGTAATGGAGCATATCAAATCCCATGGTGAATAAAATGTAACCGG

Protein

Uniprot

Uniprot term	Description
P95896	Amidase OS=Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) OX=273057 GN=SSO2122 PE=1 SV=1
Q9AHE8	Urethanase OS=Rhizobium radiobacter OX=358 GN=amdA PE=1 SV=1
P22984	Amidase OS=Rhodococcus erythropolis OX=1833 GN=amdA PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01425	Amidase	Amidase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000120	Family	Amidase	Interproscan
IPR036928	Homologous_superfamily	Amidase signature (AS) superfamily	Interproscan
IPR023631	Domain	Amidase signature domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11895	TRANSAMIDASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01426	E3.5.1.4, amiE; amidase	EC:3.5.1.4	Styrene degradation	ko00643	deepkoala