Detailed information of pspe_0.1.m1.12567.m1 in Pachyseris speciosa

Genomic Location: Sc0000038:1910143...1921538
NR annotation: CAH3180693.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q3ZCE0U6 snRNA-associated Sm-like protein LSm8 OS=Bos taurus OX=9913 GN=LSM8 PE=3 SV=3
O95777U6 snRNA-associated Sm-like protein LSm8 OS=Homo sapiens OX=9606 GN=LSM8 PE=1 SV=3
Q6ZWM4U6 snRNA-associated Sm-like protein LSm8 OS=Mus musculus OX=10090 GN=Lsm8 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07690MFS_1Major Facilitator SuperfamilyFamilyInterproscan
PF01423LSMLSM domain DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036259Homologous_superfamilyMFS transporter superfamilyInterproscan
IPR004752FamilyAmpG-like permease/Acetyl-coenzyme A transporter 1Interproscan
IPR010920Homologous_superfamilyLSM domain superfamilyInterproscan
IPR001163DomainSm domain, eukaryotic/archaea-typeInterproscan
IPR011701FamilyMajor facilitator superfamilyInterproscan
IPR034103DomainSm-like protein Lsm8Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12778SOLUTE CARRIER FAMILY 33 ACETYL-COA TRANSPORTER -RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0005688Cellular ComponentU6 snRNPInterproscan
GO:0046540Cellular ComponentU4/U6 x U5 tri-snRNP complexInterproscan

TOP