Gene detail

Detailed information of pspe_0.1.m1.13082.m1 in Pachyseris speciosa

Genomic Location: Sc0000043:313756...316729
NR annotation: XP_035696814.1, deleted in malignant brain tumors 1 protein-like [Branchiostoma floridae]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q95218	Scavenger receptor cysteine-rich domain-containing protein DMBT1 OS=Oryctolagus cuniculus OX=9986 GN=Dmbt1 PE=1 SV=2
A1L0T3	Scavenger receptor cysteine-rich domain-containing group B protein OS=Mus musculus OX=10090 GN=Ssc4d PE=2 SV=2
Q60997	Scavenger receptor cysteine-rich domain-containing protein DMBT1 OS=Mus musculus OX=10090 GN=Dmbt1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01477	PLAT	PLAT/LH2 domain	Domain	Interproscan
PF00530	SRCR	Scavenger receptor cysteine-rich domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050686	Family	SRCR-S1 Scavenger Receptor	Interproscan
IPR036772	Homologous_superfamily	SRCR-like domain superfamily	Interproscan
IPR001024	Domain	PLAT/LH2 domain	Interproscan
IPR001190	Domain	SRCR domain	Interproscan
IPR017448	Domain	SRCR-like domain	Interproscan
IPR036392	Homologous_superfamily	PLAT/LH2 domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48071	SRCR DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016020	Cellular Component	membrane	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00280	LOXL2_3_4; lysyl oxidase-like protein 2/3/4	EC:1.4.3.-	Enzymes with EC numbers	-	deepkoala