Detailed information of pspe_0.1.m1.14049.m1 in Pachyseris speciosa

Genomic Location: Sc0000050:1768462...1784050
NR annotation: XP_015771143.1, PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit PAN2-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q504Q3PAN2-PAN3 deadenylation complex catalytic subunit PAN2 OS=Homo sapiens OX=9606 GN=PAN2 PE=1 SV=3
Q8BGF7PAN2-PAN3 deadenylation complex catalytic subunit Pan2 OS=Mus musculus OX=10090 GN=Pan2 PE=1 SV=1
Q6IE70PAN2-PAN3 deadenylation complex catalytic subunit Pan2 OS=Rattus norvegicus OX=10116 GN=Pan2 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13423UCH_1Ubiquitin carboxyl-terminal hydrolaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR028889DomainUbiquitin specific protease domainInterproscan
IPR050785FamilyPAN2-PAN3 complex catalytic subunitInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR028881DomainPAN2, UCH domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15728DEADENYLATION COMPLEX CATALYTIC SUBUNIT PAN2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000289Biological Processnuclear-transcribed mRNA poly(A) tail shorteningInterproscan
GO:0000932Cellular ComponentP-bodyInterproscan
GO:0004535Molecular Functionpoly(A)-specific ribonuclease activityInterproscan
GO:0031251Cellular ComponentPAN complexInterproscan

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