Gene detail

Detailed information of pspe_0.1.m1.14052.m1 in Pachyseris speciosa

Genomic Location: Sc0000050:1757202...1765562
NR annotation: KAJ7336671.1, poly(A)-specific ribonuclease [Desmophyllum pertusum]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q5F450	PAN2-PAN3 deadenylation complex catalytic subunit PAN2 OS=Gallus gallus OX=9031 GN=PAN2 PE=2 SV=1
Q504Q3	PAN2-PAN3 deadenylation complex catalytic subunit PAN2 OS=Homo sapiens OX=9606 GN=PAN2 PE=1 SV=3
Q6IE70	PAN2-PAN3 deadenylation complex catalytic subunit Pan2 OS=Rattus norvegicus OX=10116 GN=Pan2 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF20770	PAN2_N	PAN2 N-terminal	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050785	Family	PAN2-PAN3 complex catalytic subunit	Interproscan
IPR048841	Domain	PAN2-PAN3 deadenylation complex catalytic subunit PAN2, N-terminal	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15728	DEADENYLATION COMPLEX CATALYTIC SUBUNIT PAN2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000289	Biological Process	nuclear-transcribed mRNA poly(A) tail shortening	Interproscan
GO:0000932	Cellular Component	P-body	Interproscan
GO:0004535	Molecular Function	poly(A)-specific ribonuclease activity	Interproscan
GO:0031251	Cellular Component	PAN complex	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan