Gene detail

Detailed information of pspe_0.1.m1.14097.m1 in Pachyseris speciosa

Genomic Location: Sc0000051:544535...550595
NR annotation: KAJ7384614.1, Fibrillin [Desmophyllum pertusum]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q9TV36	Fibrillin-1 OS=Sus scrofa OX=9823 GN=FBN1 PE=2 SV=1
P35555	Fibrillin-1 OS=Homo sapiens OX=9606 GN=FBN1 PE=1 SV=4
Q61554	Fibrillin-1 OS=Mus musculus OX=10090 GN=Fbn1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00683	TB	TB domain	Family	Interproscan
PF12662	cEGF	Complement Clr-like EGF-like	Domain	Interproscan
PF07645	EGF_CA	Calcium-binding EGF domain	Domain	Interproscan
PF00008	EGF	EGF-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000742	Domain	EGF-like domain	Interproscan
IPR036773	Homologous_superfamily	TGF-beta binding (TB) domain superfamily	Interproscan
IPR018097	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan
IPR017878	Domain	TB domain	Interproscan
IPR026823	Domain	Complement Clr-like EGF domain	Interproscan
IPR000152	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR009030	Homologous_superfamily	Growth factor receptor cysteine-rich domain superfamily	Interproscan
IPR049883	Domain	NOTCH1 EGF-like calcium-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24039	FIBRILLIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan