Detailed information of pspe_0.1.m1.14424.m1 in Pachyseris speciosa

Genomic Location: Sc0000053:1873947...1876925
NR annotation: XP_015754071.1, PREDICTED: cartilage oligomeric matrix protein-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q1L8P7Thrombospondin-3b OS=Danio rerio OX=7955 GN=thbs3b PE=3 SV=1
Q9R0G6Cartilage oligomeric matrix protein OS=Mus musculus OX=10090 GN=Comp PE=1 SV=2
P35444Cartilage oligomeric matrix protein OS=Rattus norvegicus OX=10116 GN=Comp PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05735TSP_CThrombospondin C-terminal regionFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR008859DomainThrombospondin, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10199THROMBOSPONDINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan

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