Detailed information of pspe_0.1.m1.14463.m1 in Pachyseris speciosa

Genomic Location: Sc0000054:807880...833004
NR annotation: XP_015749517.1, PREDICTED: lisH domain-containing protein C1711.05-like [Acropora digitifera]
Species Pachyseris speciosa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q14978Nucleolar and coiled-body phosphoprotein 1 OS=Homo sapiens OX=9606 GN=NOLC1 PE=1 SV=2
P41777Nucleolar and coiled-body phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Nolc1 PE=1 SV=2
E9Q5C9Nucleolar and coiled-body phosphoprotein 1 OS=Mus musculus OX=10090 GN=Nolc1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004438 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05022
all species →		SRP40_CSRP40, C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007718
all species →		DomainSrp40, C-terminalInterproscan
IPR039191
all species →		FamilyNopp140-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23216
all species →		NUCLEOLAR AND COILED-BODY PHOSPHOPROTEIN 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005654
all species →		Cellular ComponentnucleoplasmInterproscan
GO:0005730
all species →		Cellular ComponentnucleolusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for pspe_0.1.m1.14463.m1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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