Detailed information of pspe_0.1.m1.15000.m1 in Pachyseris speciosa

Genomic Location: Sc0000059:53615...56270
NR annotation: XP_020610523.1, roundabout homolog 1-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q98902Neural cell adhesion molecule L1 OS=Takifugu rubripes OX=31033 GN=l1cam PE=3 SV=1
Q9P232Contactin-3 OS=Homo sapiens OX=9606 GN=CNTN3 PE=1 SV=3
Q69Z26Contactin-4 OS=Mus musculus OX=10090 GN=Cntn4 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13855LRR_8Leucine rich repeatRepeatInterproscan
PF13927Ig_3Immunoglobulin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR050467FamilyLeucine-rich repeat and fibronectin type-III domain-containingInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR003591RepeatLeucine-rich repeat, typical subtypeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45842SYNAPTIC ADHESION-LIKE MOLECULE SALMInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan

TOP