Detailed information of pspe_0.1.m1.16051.m1 in Pachyseris speciosa

Genomic Location: Sc0000067:828397...876268
NR annotation: XP_022793595.1, integrin beta-1-like isoform X1 [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P07228Integrin beta-1 OS=Gallus gallus OX=9031 GN=ITGB1 PE=1 SV=1
Q9GLP0Integrin beta-1 OS=Sus scrofa OX=9823 GN=ITGB1 PE=2 SV=1
P53712Integrin beta-1 OS=Bos taurus OX=9913 GN=ITGB1 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08725Integrin_b_cytIntegrin beta cytoplasmic domainDomainInterproscan
PF18372I-EGF_1Integrin beta epidermal growth factor like domain 1DomainInterproscan
PF00362Integrin_betaIntegrin beta chain VWA domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014836DomainIntegrin beta subunit, cytoplasmic domainInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR032695Homologous_superfamilyIntegrin domain superfamilyInterproscan
IPR040622DomainIntegrin beta, epidermal growth factor-like domain 1Interproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR015812FamilyIntegrin beta subunitInterproscan
IPR002369DomainIntegrin beta subunit, VWA domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10082INTEGRIN BETA SUBUNITInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005178Molecular Functionintegrin bindingInterproscan
GO:0005925Cellular Componentfocal adhesionInterproscan
GO:0007160Biological Processcell-matrix adhesionInterproscan
GO:0007229Biological Processintegrin-mediated signaling pathwayInterproscan
GO:0008305Cellular Componentintegrin complexInterproscan
GO:0009986Cellular Componentcell surfaceInterproscan
GO:0016477Biological Processcell migrationInterproscan
GO:0033627Biological Processcell adhesion mediated by integrinInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K05719ITGB1, CD29; integrin beta 1-CD moleculesko04090deepkoala

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