Detailed information of pspe_0.1.m1.16381.m1 in Pachyseris speciosa

Genomic Location: Sc0000070:701308...722551
NR annotation: XP_022801092.1, von Willebrand factor D and EGF domain-containing protein-like [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q90Y57Protein jagged-1a OS=Danio rerio OX=7955 GN=jag1a PE=2 SV=1
Q90Y54Protein jagged-1b OS=Danio rerio OX=7955 GN=jag1b PE=2 SV=1
Q63722Protein jagged-1 OS=Rattus norvegicus OX=10116 GN=Jag1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00059Lectin_CLectin C-type domainDomainInterproscan
PF00008EGFEGF-like domainDomainInterproscan
PF12661hEGFHuman growth factor-like EGFDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742DomainEGF-like domainInterproscan
IPR035976Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR001304DomainC-type lectin-likeInterproscan
IPR000436DomainSushi/SCR/CCP domainInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR050691FamilyHyaluronan-binding ProteoglycanInterproscan
IPR013032Conserved_siteEGF-like, conserved siteInterproscan
IPR016186Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22804AGGRECAN/VERSICAN PROTEOGLYCANInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0002052Biological Processpositive regulation of neuroblast proliferationInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0010001Biological Processglial cell differentiationInterproscan
GO:0045202Cellular ComponentsynapseInterproscan
GO:0072534Cellular Componentperineuronal netInterproscan

TOP