Detailed information of pspe_0.1.m1.16755.m1 in Pachyseris speciosa

Genomic Location: Sc0000073:1495569...1497863
NR annotation: XP_020625212.1, neuronal PAS domain-containing protein 2-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8QGQ6Circadian locomoter output cycles protein kaput OS=Gallus gallus OX=9031 GN=CLOCK PE=1 SV=2
Q91YA8Circadian locomoter output cycles protein kaput OS=Spalax judaei OX=134510 GN=Clock PE=2 SV=1
Q6YGZ4Circadian locomoter output cycles protein kaput OS=Tyto alba OX=56313 GN=CLOCK PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08447PAS_3PAS foldDomainInterproscan
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013655DomainPAS fold-3Interproscan
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR000014DomainPAS domainInterproscan
IPR035965Homologous_superfamilyPAS domain superfamilyInterproscan
IPR047230FamilyCircadian locomoter output cycles protein kaput-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46055CIRCADIAN LOCOMOTER OUTPUT CYCLES PROTEIN KAPUTInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0032922Biological Processcircadian regulation of gene expressionInterproscan
GO:1990513Cellular ComponentCLOCK-BMAL transcription complexInterproscan

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