Genomic Location: Sc0000079:919077...919586
NR annotation: PFX13527.1, Pogo transposable element with KRAB domain [Stylophora pistillata]
| CDS | |||||
| pspe_0.1.m1.17406.m1 | |||||
| Transcript |
| pspe_0.1.m1.17406.m1 |
| Protein |
| pspe_0.1.m1.17406.m1 |
| Uniprot term | Description |
|---|---|
| Q4W5G0 | Tigger transposable element-derived protein 2 OS=Homo sapiens OX=9606 GN=TIGD2 PE=1 SV=1 |
| Q0VBL1 | Tigger transposable element-derived protein 2 OS=Mus musculus OX=10090 GN=Tigd2 PE=2 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03221 | HTH_Tnp_Tc5 | Tc5 transposase DNA-binding domain | Domain | Interproscan |
| PF04218 | CENP-B_N | CENP-B N-terminal DNA-binding domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR006600 | Domain | HTH CenpB-type DNA-binding domain | Interproscan |
| IPR009057 | Homologous_superfamily | Homeobox-like domain superfamily | Interproscan |
| IPR007889 | Domain | DNA binding HTH domain, Psq-type | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| - | - | - |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K07483 | K07483; transposase | - | Replication and repair | - | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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