Gene detail

Detailed information of pspe_0.1.m1.17414.m1 in Pachyseris speciosa

Genomic Location: Sc0000079:1035577...1041581
NR annotation: XP_044183585.1, uncharacterized protein LOC122964149 isoform X1 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

pspe_0.1.m1.17414.m1

ATGCACGCAGACGATATTATATTGTCAGGAAATGAAAGTGACAGCTCAATGGAGGACGAGACTAATCTCCACAAAGTACAAGCCATGGAAATCAAAGAGGTTTCCTCAAGTTTACCGAATGTCTCTGATGGTAAACATAGCGAGTTCAAATACCCTGAAGAGATCGTTTGCAGCACCGGTTTAACTGACTTTCAGGGAATGGAAGTGCAGCCAGAGGATATCATATCTTCTGTGAAGGACAGGGAAAGTGCAGTAAAAGACGAAGATCCCCCAGTATATCCATCTTGCCCATTACGGCTTTCCGAGAGTGTATTGCTTATCATGACATTGGCAATTCGACATAATCTTACTGGTTATGCTTTGGCTGATGTGATCAAACTTATTGATTTGCACTGTGTTCGAGGCCTAATAGCCACTCAAGAATTGAAGTCTTACTTTGCGAACTCTAAAGAAGCCTTGGAACTGTTCTACTACTGCAAATGTTGTTATAGTTTGCTTCCGACGGAACAGGCTTCTGTTTGTCCCATATGTGATTCAGACCTAAGCTCCTCCGCAGCAAAGAGCTACTTCATGGTATTGCCAATCGAACGTGAAGGCTTTTATGAGGACCTGTTACATCGTTTTACAAGGCCAAAGACCGCAGACTGCATCTGTGATGTTTATCATGGACATCAAtatcaaaaattgttttgtaATGGAGGCATGTTGTCAgatcaaaacaatttttccCTGAAAGTCAATACTGATGGAGTGCCTTTTTTCAAGTCATCTGGATTTTCATTATGGCCCatcttttttgaaataaatgaattacCACCTTGGAAAAGGAGACAAGTCAATAACTTAGTGATGGGAGGGCTATGGTTTGGAGAGCACAAACCAGTCATGGGAACATTCCTGAAACCATTCCAAGAAGCACTCTCCAGACTTGAAATTCACGGAACAACTTTTCAGCTTCctaacaagaaaacaattaaGTCAAAGATCTATCTACTCAGTGGTGTCTTTGACCTACCAGCTAAGAGCTTAGTATTGGAGGAAATCCAGTTCAATGGATTCTGTGGATGTTCCTTCTGTGTTGAAGCAGGTAAATCAGTGAAGGCCAAAGATGGAGGACAGGGTCAAGTGCATGTTTATCCATTTAATGACAAGTCAGAAACAGGCCATGCTAAACAACGTACCCATCAAGACACCATAGCTAATGGAATGAAGTCCCTGGAGGACCCTCTGGGAAAACCAGTGTTTGGAGTAAAAGGAGTGTGTCAGTTTGCAAATCTTAAATACTTTGATGTGGTTGATGGTGTTGCAGTAGATTACATGCATGGGATCTTACTTGGAGTGAGCAAACAGCTCCTAAAGCTATGGCTGGACTCACAGTTCAGTGGTGAGGACTGGTACTGTGGAACCCGTGTTACCTTAATTGATGAAAGGTTAATGGACATCAAGCCACCAAATCCTCAGAACTCCGTGCATGGCTGTTCCACTATAGCCTTCCATGTCTCAGAGGAATCCTGCCAGAAAATCTGGCTTTTAAACCAAGAGTCCATTACAAATGAAGACCTTGCCTACAGCAATTTCTGTCTGCTAAAGTTTGTTCTGTATTTTGATGGCCTCTATGATTGTGACATCAATATCAGCTATGCAAAGTCTTCCAGAATTATCAAGAAGACTAGAGGAGGATTCTCCTGCTGCAAAATTTTATTCAAGTACATGATACTATGCACTGTCACATGTCACAAGGCCAGACTAGTTCAGTCCCTTGGAATGACAACTTTTGGTACAGTGAAAAAGTTTAAGAGGATAGAGATTGGAAGACAGGTGTTCCACAGCAAGGCATATTTGCGGGTATCCAAGAGAAATAGTTACACTGTGGTATACAGAGAGAAGGCAGATCAAGCAGAATCCTATGGCCAGATTCAGTTCTTTCTTCTCCATCAACCACCTTGTACACATGGGCCAGTACATCCCTGTCAAGTCTGCAAGGAAACACCATTTGCAGTAATATGGAAACTGGAACCAGAGAGATCTGTTCAGTTTGTTGACTGTGAATCTGAAATCACTTTGAATCACATTCAAGCTGTAAAGAAGCTA

Transcript

pspe_0.1.m1.17414.m1

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02992	Transposase_21	Transposase family tnp2	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004242	Family	Transposon, En/Spm-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46579	F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-