Detailed information of pspe_0.1.m1.18095.m1 in Pachyseris speciosa

Genomic Location: Sc0000085:213799...247631
NR annotation: KAJ7382863.1, hypothetical protein OS493_032232 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q13591Semaphorin-5A OS=Homo sapiens OX=9606 GN=SEMA5A PE=1 SV=3
D3ZTD8Semaphorin-5A OS=Rattus norvegicus OX=10116 GN=Sema5a PE=1 SV=1
Q62217Semaphorin-5A OS=Mus musculus OX=10090 GN=Sema5a PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01403SemaSema domainRepeatInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF01437PSIPlexin repeatFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR001627DomainSema domainInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR036352Homologous_superfamilySema domain superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR027231FamilySemaphorinInterproscan
IPR016201DomainPSI domainInterproscan
IPR002165RepeatPlexin repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11036SEMAPHORINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0001755Biological Processneural crest cell migrationInterproscan
GO:0007411Biological Processaxon guidanceInterproscan
GO:0030215Molecular Functionsemaphorin receptor bindingInterproscan
GO:0030335Biological Processpositive regulation of cell migrationInterproscan
GO:0045499Molecular Functionchemorepellent activityInterproscan
GO:0048843Biological Processnegative regulation of axon extension involved in axon guidanceInterproscan
GO:0071526Biological Processsemaphorin-plexin signaling pathwayInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06841SEMA5; semaphorin 5-Axon guidanceko04360deepkoala

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