Detailed information of pspe_0.1.m1.18918.m1 in Pachyseris speciosa

Genomic Location: Sc0000092:324598...334439
NR annotation: XP_015762844.1, PREDICTED: outer dense fiber protein 3-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q96PU9Ciliary microtubule associated protein 1A OS=Homo sapiens OX=9606 GN=CIMAP1A PE=1 SV=1
Q920N1Ciliary microtubule associated protein 1A OS=Mus musculus OX=10090 GN=Cimap1a PE=1 SV=2
Q2TBH0Ciliary microtubule associated protein 1A OS=Bos taurus OX=9913 GN=CIMAP1A PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07004SHIPPO-rptSperm-tail PG-rich repeatRepeatInterproscan
PF10044LIN52Retinal tissue proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051291FamilyCiliary Microtubule AssociatedInterproscan
IPR010736RepeatSperm-tail PG-rich repeatInterproscan
IPR018737FamilyProtein LIN52Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21580SHIPPO-1-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005856Cellular ComponentcytoskeletonInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0070176Cellular ComponentDRM complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K25636ODF3; outer dense fiber protein 3-Cilium and associated proteinsko03037deepkoala

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