Gene detail

Detailed information of pspe_0.1.m1.19373.m1 in Pachyseris speciosa

Genomic Location: Sc0000096:884319...885250
NR annotation: XP_022789280.1, fibropellin-1-like isoform X4 [Stylophora pistillata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P10041	Neurogenic locus protein delta OS=Drosophila melanogaster OX=7227 GN=Delta PE=1 SV=2
P55067	Neurocan core protein OS=Rattus norvegicus OX=10116 GN=Ncan PE=1 SV=1
O35474	EGF-like repeat and discoidin I-like domain-containing protein 3 OS=Mus musculus OX=10090 GN=Edil3 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00008	EGF	EGF-like domain	Domain	Interproscan
PF00040	fn2	Fibronectin type II domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000742	Domain	EGF-like domain	Interproscan
IPR000562	Domain	Fibronectin type II domain	Interproscan
IPR036943	Homologous_superfamily	Fibronectin type II domain superfamily	Interproscan
IPR050906	Family	Notch signaling pathway	Interproscan
IPR013806	Homologous_superfamily	Kringle-like fold	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24044	NOTCH LIGAND FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005112	Molecular Function	Notch binding	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan