Detailed information of pspe_0.1.m1.19913.m1 in Pachyseris speciosa

Genomic Location: Sc0000101:241650...265983
NR annotation: XP_020605014.1, FAS-associated factor 2-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q3TDN2FAS-associated factor 2 OS=Mus musculus OX=10090 GN=Faf2 PE=1 SV=2
Q96CS3FAS-associated factor 2 OS=Homo sapiens OX=9606 GN=FAF2 PE=1 SV=2
Q2HJD0FAS-associated factor 2 OS=Bos taurus OX=9913 GN=FAF2 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyULD|UFD|UBX

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21021FAF1Fas-associated factor 1DomainInterproscan
PF00789UBXUBX domainDomainInterproscan
PF14555UBA_4UBA-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001012DomainUBX domainInterproscan
IPR049483DomainFas-associated factor 1/2-like, UAS domainInterproscan
IPR036249Homologous_superfamilyThioredoxin-like superfamilyInterproscan
IPR006577DomainUASInterproscan
IPR050730FamilyUBX domain-containing proteinInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23322FAS-ASSOCIATED PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0030433Biological Processobsolete ubiquitin-dependent ERAD pathwayInterproscan
GO:0043130Molecular Functionubiquitin bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K18726FAF2, UBXD8; FAS-associated factor 2-Messenger RNA biogenesisko03019deepkoala

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