Detailed information of pspe_0.1.m1.20058.m1 in Pachyseris speciosa

Genomic Location: Sc0000102:1372551...1393863
NR annotation: KAJ7388934.1, AP-4 complex subunit beta-1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9Y6B7AP-4 complex subunit beta-1 OS=Homo sapiens OX=9606 GN=AP4B1 PE=1 SV=2
Q9WV76AP-4 complex subunit beta-1 OS=Mus musculus OX=10090 GN=Ap4b1 PE=1 SV=2
Q9LDK9Beta-adaptin-like protein A OS=Arabidopsis thaliana OX=3702 GN=BETAA-AD PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09066B2-adapt-app_CBeta2-adaptin appendage, C-terminal sub-domainDomainInterproscan
PF01602Adaptin_NAdaptin N terminal regionRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR026739FamilyAP complex subunit betaInterproscan
IPR016342FamilyAP-1/2/4 complex subunit betaInterproscan
IPR012295Homologous_superfamilyTBP domain superfamilyInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR015151DomainBeta-adaptin appendage, C-terminal subdomainInterproscan
IPR002553DomainClathrin/coatomer adaptor, adaptin-like, N-terminalInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11134ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0015031Biological Processprotein transportInterproscan
GO:0030276Molecular Functionclathrin bindingInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0030131Cellular Componentclathrin adaptor complexInterproscan
GO:0030117Cellular Componentmembrane coatInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12401AP4B1; AP-4 complex subunit beta-1-Membrane traffickingko04131deepkoala

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