Gene detail

Detailed information of pspe_0.1.m1.20632.m1 in Pachyseris speciosa

Genomic Location: Sc0000109:49809...55576
NR annotation: XP_015758443.1, PREDICTED: DNA cross-link repair protein SNM1-like [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q5QJC4	DNA cross-link repair 1A protein OS=Gallus gallus OX=9031 GN=DCLRE1A PE=1 SV=1
Q6PJP8	DNA cross-link repair 1A protein OS=Homo sapiens OX=9606 GN=DCLRE1A PE=1 SV=3
Q9JIC3	DNA cross-link repair 1A protein OS=Mus musculus OX=10090 GN=Dclre1a PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07522	DRMBL	DNA repair metallo-beta-lactamase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011084	Domain	DNA repair metallo-beta-lactamase	Interproscan
IPR036866	Homologous_superfamily	Ribonuclease Z/Hydroxyacylglutathione hydrolase-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23240	DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003684	Molecular Function	damaged DNA binding	Interproscan
GO:0006303	Biological Process	double-strand break repair via nonhomologous end joining	Interproscan
GO:0035312	Molecular Function	5'-3' DNA exonuclease activity	Interproscan
GO:0036297	Biological Process	interstrand cross-link repair	Interproscan