Detailed information of pspe_0.1.m1.20956.m1 in Pachyseris speciosa

Genomic Location: Sc0000112:994639...997941
NR annotation: KAJ7384927.1, positive regulation of MHC class I biosynthetic process [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8K3Z0Nucleotide-binding oligomerization domain-containing protein 2 OS=Mus musculus OX=10090 GN=Nod2 PE=1 SV=1
Q6E804Nucleotide-binding oligomerization domain-containing protein 2 OS=Bos taurus OX=9913 GN=NOD2 PE=2 SV=1
Q9HC29Nucleotide-binding oligomerization domain-containing protein 2 OS=Homo sapiens OX=9606 GN=NOD2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05729NACHTNACHT domainDomainInterproscan
PF13516LRR_6Leucine Rich repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038359Homologous_superfamilyConnexin, N-terminal domain superfamilyInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR007111DomainNACHT nucleoside triphosphataseInterproscan
IPR051261FamilyNOD-like receptor (NLR)Interproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24106NACHT, LRR AND CARD DOMAINS-CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan

TOP