Gene detail

Detailed information of pspe_0.1.m1.2139.m1 in Pachyseris speciosa

Genomic Location: Sc0000001:186375...191476
NR annotation: CAH3168195.1, unnamed protein product [Porites evermanni]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

pspe_0.1.m1.2139.m1

ctatttctccTGTATTGTTTATTTAAGGACACCAGACATGCCCACCTACCGCAACTCTAATTGTAAGCGATTACCttaattaattttgttatcTGCGATGGTACATAAAAACTCGCACCACGTTATAATGGGACAAAATCGACACAAAATAGAAAAGCGGCACCCTTGTGGTCAAGGGCAAAGGATATAATTGAAAGAGGAGCGAGTATTGTGGGTTTTTGGAATGCTGGACATTTTTCTCTCCTCAGCACGGTGTTGTTCTTGCTCAGCCTTATATCAACTGGCTTTTCTTGTCTCACGCGTCAAAATGGACGCTAGGTTTAAAGCGACATCTAGGCGATACCTATTGTTTTTCTCTCTGAATTGCTTGATTTCCTTCATCCAGGGACAACAAAGCCAGGAGAAAAAGTACTTGGACATCCACGTAATGACTGAGAGAAAGCGCAGCGACACACGAAGCCTTCCGTTTCACCGAGAAACACAGTTGTACTCCCGGTCCAGCCGAAGCCATCTTCGTATACATGGGAAAAAAATTGACGCTCTGGGAAGAGATGGCGACGAATATGCGAAGTTAGTGATTGAATCCGACAACTTTGGAAGGGTGCGAATTCGAGGAGCGTTAACAAATTACTACTTGTGCATCAAACGAAACGCGACCTTGATCGGTAGAAAGCCCACTAAATCCAAACGATGTGTATTTTACGAGACGTACGCTGAAAACCACTACACAGAATTTCTATCTGCTTATAACGAGAATTGGACCATTGCGGTGTCCAAGAAGGGTAAAATGAGGCCTGGCCACAAAGGACGGAGGGGACAAAGAACTGTCCAGTTTATTGAACGAGCTTCAAAGATCATCATTCAAACTACAAATGTCAGAGAGTCCCTTTACCACGGCCTCCGTGATCACATTGAGCAGCTGTTGCGTGCGTACAGAGCTAAAGAAGACAACGGTAACAAAGATAAGACAAGGAAAATGCCCCATCCAGGAGTATATATACAATCCATAAAacgtaaaaacaaaataaaaagaaaagagaagaagaTGAGGCAACGATCAAAGAAGAGGCTACTGAAACTGCTCAGAAAAGAACAAGGCAAGACGGACAGGAAAGAAAAAACTTAAGCAGTCCCCTCGTACTTTGTTATCTTACTTTCTACATCTTTCTATATCTAACGTTTTGTGATTTTCGCTGTTAATGTtgtctatttgtttgtttcaagaaaagaaagtagGAAAGTCTATATCTTAGCAAGTATCAAAGTTTCGTATTCCTTTACAACGCTATCTTCAACAAAGATAACTAGGTGACAAAGTCGTATATAATATCGCCATATAAGAACCCGTTTTTCCCTAATCTTTTGCTGATAATTGGCCTCCGTCGCTTTTCTCCAGAAACACTTTGCTGGTTTCAGTATTATAGTTAGTAAGTTAAAGTGCGATCAAAAAGTGGGATAAAGTGCGAATATAGAAGAGCGTCTCGTTATAAACTAAACAGGTTTTCTAAAGAGCAAGATTTGTAACTAGACAAAATGCAAAGGTGACGGCAGCGAGTAGACGAACAAGCAGACCGCCGAGAATACATATTGAATGTGCAACATCACAATGGGTTTATGTTAAGCTGaagaagttttctttcttttagccTTTATTTGGCGATCGCGGAAGTTTGTTTCCATCTGATCGAACAAAAATGTCGAAAGCTGTTCTTGATTGCAGTACTGATGTTTGTGTGGAAACTAggctaaaaataaattaaataaacgccaaaaatgagaaaaaatgaACCAAAGAGACATGTACATCGCTATTGTCAGAAATGTTTTATCCTCGCTTTTGTCTTTCAACTGTCCTTCCCTAATcaattacagtaaaaacccgcaactaagaacctacattttcgGGAAGTAGCCTACccagattcttatataaatggtagttaacacaattttaggctacttaggttcttaaaataggttcttaaaagcaaataaaactaagccacaaaacaagatggttattggcctattttctattttctattaaaaaaccCTCATTTttcagtaatgagaatctgcttttttcttcaaataggattcttgcactgcagctgtaatgtactaatatgattttagaaaataagaacctgttttttaggctaaataggttcttgtttatagggggtataaaatccaaattttaggctaacaggttctcactgttcaggttcttagttgcgggtttttgcTGTACCTTTTACCACCATCCATCATTTTACGACTGTATTAGCTCAGGCTGTTAACTAGGGTGAGCTAAATCCCTGTGCATTTCCCAACATTCTGAGGCATTTCTCTACATTCACTGGATATTTGAAGAGAAGATTAGGCAGTCTATTTACTTATTTGCAATCTAACACTGATGATTTTTTAATTATAGAGGGATGTTATAGAGATGTGATATCAGATTGAAGTCGAAATTGTCCATTTTTATACTTTGTAACGGATTACAATAGCCCGTTATAGTTTTTAAGTTTACTTGTTTTGTAAAATCACCTGTTTTACGGCAAAAGGAAACCGAATTTATTCTTTCCGCGCTGTAGTTTacattttactgacaaaaacaaAAGTATGACAGACTTTACGCTATTTTCAAGTTGTACCTAAAATAAGGTGACATCGGCACAAAATGTTCCAGTTAAAAGGCATAATAAggataaaatgttg

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00167	FGF	Fibroblast growth factor	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002209	Family	Fibroblast growth factor family	Interproscan
IPR008996	Homologous_superfamily	Cytokine IL1/FGF	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11486	FIBROBLAST GROWTH FACTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008083	Molecular Function	growth factor activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K04358	FGF; fibroblast growth factor	-	Glycosaminoglycan binding proteins	ko00536	deepkoala