Detailed information of pspe_0.1.m1.21735.m1 in Pachyseris speciosa

Genomic Location: Sc0000120:354836...363939
NR annotation: CAH3156089.1, unnamed protein product [Porites lobata]
Species Pachyseris speciosa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9P283Semaphorin-5B OS=Homo sapiens OX=9606 GN=SEMA5B PE=1 SV=4
A2VEC9SCO-spondin OS=Homo sapiens OX=9606 GN=SSPOP PE=2 SV=2
Q13591Semaphorin-5A OS=Homo sapiens OX=9606 GN=SEMA5A PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001175 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00090
all species →		TSP_1Thrombospondin type 1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036383
all species →		Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR000884
all species →		RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR039942
all species →		FamilySomatomedin-B and thrombospondin type-1 domain-containing proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR20920
all species →		RPE-SPONDINInterproscan

 Gene Ontology
No Gene Ontology signature was detected for pspe_0.1.m1.21735.m1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for pspe_0.1.m1.21735.m1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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