Gene detail

Detailed information of pspe_0.1.m1.21775.m1 in Pachyseris speciosa

Genomic Location: Sc0000120:1070772...1074010
NR annotation: XP_015760188.1, PREDICTED: E3 ubiquitin-protein ligase MARCH3-like [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q1LVZ2	E3 ubiquitin-protein ligase MARCHF2 OS=Danio rerio OX=7955 GN=marchf2 PE=2 SV=1
Q0IH10	E3 ubiquitin-protein ligase MARCHF3 OS=Xenopus laevis OX=8355 GN=marchf3 PE=2 SV=1
Q8BRX9	E3 ubiquitin-protein ligase MARCHF3 OS=Mus musculus OX=10090 GN=Marchf3 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12906	RINGv	RING-variant domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR011016	Domain	Zinc finger, RING-CH-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46065	E3 UBIQUITIN-PROTEIN LIGASE MARCH 2/3 FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004842	Molecular Function	ubiquitin-protein transferase activity	Interproscan
GO:0016567	Biological Process	protein ubiquitination	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan