Gene detail

Detailed information of pspe_0.1.m1.22459.m1 in Pachyseris speciosa

Genomic Location: Sc0000128:344012...350746
NR annotation: CAH3163167.1, unnamed protein product [Porites lobata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q7K4N3	Nuclear cap-binding protein subunit 1 OS=Drosophila melanogaster OX=7227 GN=Cbp80 PE=1 SV=1
B4L2J8	Nuclear cap-binding protein subunit 1 OS=Drosophila mojavensis OX=7230 GN=Cbp80 PE=3 SV=1
B4I0W6	Nuclear cap-binding protein subunit 1 OS=Drosophila sechellia OX=7238 GN=Cbp80 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09090	MIF4G_like_2	MIF4G like	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR027159	Family	Nuclear cap-binding protein subunit 1	Interproscan
IPR015174	Domain	MIF4G-like, type 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12412	CAP BINDING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000184	Biological Process	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	Interproscan
GO:0000339	Molecular Function	RNA cap binding	Interproscan
GO:0003729	Molecular Function	mRNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005845	Cellular Component	obsolete mRNA cap binding complex	Interproscan
GO:0005846	Cellular Component	nuclear cap binding complex	Interproscan
GO:0006406	Biological Process	mRNA export from nucleus	Interproscan
GO:0016070	Biological Process	RNA metabolic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02109	ATPF0B, atpF; F-type H+-transporting ATPase subunit b	-	Photosynthesis proteins	ko00194	deepkoala